相关论文: Non-standard discretization of biological models

Kahan introduced an explicit method of discretization for systems of first order differential equations with nonlinearities of degree at most two (quadratic vector fields). Kahan's method has attracted much interest due to the fact that it…

In this paper we apply Kahan's nonstandard discretization to three dimensional Lotka-Volterra equations in bi-Hamiltonian form. The periodicity of the solutions and all polynomial and non-polynomial invariants are well preserved in…

Dynamical systems are a valuable asset for the study of population dynamics. On this topic, much has been done since Lotka and Volterra presented the very first continuous system to understand how the interaction between two species -- the…

Kahan discretization is applicable to any system of ordinary differential equations on $\mathbb R^n$ with a quadratic vector field, $\dot{x}=f(x)=Q(x)+Bx+c$, and produces a birational map $x\mapsto \widetilde{x}$ according to the formula…

We investigate discretization strategies for a recently introduced class of energy-based models. The model class encompasses classical port-Hamiltonian systems, generalized gradient flows, and certain systems with algebraic constraints. Our…

We consider a biochemical model that consists of a system of partial differential equations based on reaction terms and subject to non--homogeneous Dirichlet boundary conditions. The model is discretised using the gradient discretisation…

The main result of this paper is the discretization of Hamiltonian systems of the form $\ddot x = -K \nabla W(x)$, where $K$ is a constant symmetric matrix and $W\colon\mathbb{R}^n\to \mathbb{R}$ is a polynomial of degree $d\le 4$ in any…

In this article, we study the long-time behavior of a finite-volume discretization for a nonlinear kinetic reaction model involving two interacting species. Building upon the seminal work of [Favre, Pirner, Schmeiser, ARMA, 2023], we extend…

We propose and analyze a structure-preserving space-time variational discretization method for the Cahn-Hilliard-Navier-Stokes system. Uniqueness and stability for the discrete problem is established in the presence of concentration…

In this paper we propose a time discretization of a system of two parabolic equations describing diffusion-driven atom rearrangement in crystalline matter. The equations express the balances of microforces and microenergy; the two phase…

We explore a new type of discretizations of lattice dynamical models of the Klein-Gordon type relevant to the existence and long-term mobility of nonlinear waves. The discretization is based on non-holonomic constraints and is shown to…

A novel integration method for quadratic vector fields was introduced by Kahan in 1993. Subsequently, it was shown that Kahan's method preserves a (modified) measure and energy when applied to quadratic Hamiltonian vector fields. Here we…

In this paper we explore the nonholonomic Lagrangian setting of mechanical systems in local coordinates on finite-dimensional configuration manifolds. We prove existence and uniqueness of solutions by reducing the basic equations of motion…

We analyze the canonical treatment of classical constrained mechanical systems formulated with a discrete time. We prove that under very general conditions, it is possible to introduce nonsingular canonical transformations that preserve the…

We analyze the method for calculation of properties of non-relativistic quantum systems based on exact diagonalization of space-discretized short-time evolution operators. In this paper we present a detailed analysis of the errors…

A broad class of nonlinear acoustic wave models possess a Hamiltonian structure in their dissipation-free limit and a gradient flow structure for their dissipative dynamics. This structure may be exploited to design numerical methods which…

In this article, we propose a finite volume discretization of a one dimensional nonlinear reaction kinetic model proposed in [Neumann, Schmeiser, Kint. Rel. Mod. 2016], which describes a 2-species recombination-generation process.…

We study the construction of a non-standard finite differences numerical scheme for a general class of two dimensional differential equations including several models in population dynamics using the idea of non-local approximation…

We present the multiplier method of constructing conservative finite difference schemes for ordinary and partial differential equations. Given a system of differential equations possessing conservation laws, our approach is based on…

Kahan's method and a two-step generalization of the discrete gradient method are both linearly implicit methods that can preserve a modified energy for Hamiltonian systems with a cubic Hamiltonian. These methods are here investigated and…