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This paper concerns the long-term behavior of population systems, and in particular of chemical reaction systems, modeled by deterministic mass-action kinetics. We approach two important open problems in the field of Chemical Reaction…

动力系统 · 数学 2012-03-21 Casian Pantea

A persistent dynamical system in $\mathbb{R}^d_{> 0}$ is one whose solutions have positive lower bounds for large $t$, while a permanent dynamical system in $\mathbb{R}^d_{> 0}$ is one whose solutions have uniform upper and lower bounds for…

动力系统 · 数学 2019-10-29 James D. Brunner , Gheorghe Craciun

Very often, models in biology, chemistry, physics, and engineering are systems of polynomial or power-law ordinary differential equations, arising from a reaction network. Such dynamical systems can be generated by many different reaction…

动力系统 · 数学 2020-01-01 Gheorghe Craciun , Jiaxin Jin , Polly Y. Yu

A frequently desirable characteristic of chemical kinetics systems is that of persistence, the property that if all the species are initially present then none of them may tend toward extinction. It is known that solutions of…

动力系统 · 数学 2014-07-15 Matthew D. Johnston , David Siegel

Chemical reaction networks with generalized mass-action kinetics lead to power-law dynamical systems. As a simple example, we consider the Lotka reactions with two chemical species and arbitrary power-law kinetics. We study existence,…

动力系统 · 数学 2022-09-14 Balázs Boros , Josef Hofbauer , Stefan Müller

We show that there exists endotactic and strongly endotactic dynamical systems that are not weakly reversible and possess infinitely many steady states. We provide a few examples in two dimensions and an example in three dimensions that…

动力系统 · 数学 2023-03-16 Samay Kothari , Abhishek Deshpande

Recurrence networks are a novel tool of nonlinear time series analysis allowing the characterisation of higher-order geometric properties of complex dynamical systems based on recurrences in phase space, which are a fundamental concept in…

混沌动力学 · 物理学 2016-04-07 Y. Zou , J. Heitzig , R. V. Donner , J. F. Donges , J. D. Farmer , R. Meucci , S. Euzzor , N. Marwan , J. Kurths

Persistence in spatially extended dynamical systems (like coarsening systems and other nonequilibrium systems) is reviewed. We discuss, in particular, the spatial correlations in the persistent regions and their evolution in time in these…

统计力学 · 物理学 2007-05-23 Purusattam Ray

An important dynamical property of biological interaction networks is persistence, which intuitively means that "no species goes extinct". It has been conjectured that dynamical system models of weakly reversible networks (i.e., networks…

动力系统 · 数学 2019-06-21 Gheorghe Craciun , Abhishek Deshpande

We establish that mass conserving single terminal-linkage networks of chemical reactions admit positive steady states regardless of network deficiency and the choice of reaction rate constants. This result holds for closed systems without…

分子网络 · 定量生物学 2015-03-19 Santiago Akle , Onkar Dalal , Ronan M. T. Fleming , Michael Saunders , Nicole Taheri , Yinyu Ye

Persistence is an important characteristic of many complex systems in nature, related to how long the system remains at a certain state before changing to a different one. The study of complex systems' persistence involves different…

Understanding the influence of structure of dispersal network on the species persistence and modeling a much realistic species dispersal in nature are two central issues in spatial ecology. A realistic dispersal structure which favors the…

适应与自组织系统 · 物理学 2017-10-18 Anubhav Gupta , Tanmoy Banerjee , Partha Sharathi Dutta

For dynamical systems arising from chemical reaction networks, persistence is the property that each species concentration remains positively bounded away from zero, as long as species concentrations were all positive in the beginning. We…

动力系统 · 数学 2016-07-29 Michael Marcondes de Freitas , Elisenda Feliu , Carsten Wiuf

Systems of differential equations with polynomial right-hand sides are very common in applications. In particular, when restricted to the positive orthant, they appear naturally (according to the law of mass-action kinetics) in ecology,…

动力系统 · 数学 2023-03-06 Gheorghe Craciun , Abhishek Deshpande , Jiaxin Jin

Robustness against the presence of environmental disruptions can be observed in many systems of chemical reaction network. However, identifying the underlying components of a system that give rise to robustness is often elusive. The…

动力系统 · 数学 2020-03-31 Noel T. Fortun , Angelyn R. Lao , Luis F. Razon , Eduardo R. Mendoza

The persistence theory has been employed by several authors in order to study persistence properties of dynamical systems generated by ordinary differential equations or maps across diverse disciplines. In this note, the author discusses a…

动力系统 · 数学 2025-09-09 N. Pant

We propose a family of models to study the evolution of ties in a network of interacting agents by reinforcement and penalization of their connections according to certain local laws of interaction. The family of stochastic dynamical…

物理与社会 · 物理学 2016-06-01 Augusto Almeida Santos , Soummya Kar , Ramayya Krishnan , José M. F. Moura

Under suitable assumptions, the dynamic behaviour of a chemical reaction network is governed by an autonomous set of polynomial ordinary differential equations over continuous variables representing the concentrations of the reactant…

动力系统 · 数学 2014-07-15 Matthew D. Johnston , David Siegel

Polynomial dynamical systems are widely used to model and study real phenomena. In biochemistry, they are the preferred choice for modelling the concentration of chemical species in reaction networks with mass-action kinetics. These systems…

代数几何 · 数学 2014-12-30 Elisenda Feliu

We show that weakly reversible mass-action systems can have a continuum of positive steady states, coming from the zeroes of a multivariate polynomial. Moreover, the same is true of systems whose underlying reaction network is reversible…

分子网络 · 定量生物学 2022-09-14 Balázs Boros , Gheorghe Craciun , Polly Y. Yu
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