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We model proteins with intramolecular bonds, such as disulfide bridges, using the concept of bonded knots -- closed loops in three-dimensional space equipped with additional bonds that connect different segments of the knot. We extend the…

几何拓扑 · 数学 2025-02-27 Boštjan Gabrovšek , Matic Simonič

We consider Wilson loop observables for Chern-Simons theory at large N and its topological string dual and extend the previous checks for this duality to the case of links. We find an interesting structure involving representation/spin…

高能物理 - 理论 · 物理学 2009-10-31 J. M. F. Labastida , Marcos Marino , Cumrun Vafa

We classify all knot diagrams of genus two and three, and give applications to positive, alternating and homogeneous knots, including a classification of achiral genus 2 alternating knots, slice or achiral 2-almost positive knots, a proof…

几何拓扑 · 数学 2008-08-30 A. Stoimenow

In this thesis we work with Khovanov homology of links and its generalizations, as well as with the homology of graphs. Khovanov homology of links consists of graded chain complexes which are link invariants, up to chain homotopy, with…

量子代数 · 数学 2016-09-07 Marko Stosic

We formulate the holographic principle for knots and links. For the "space" of all knots and links, torus knots T(2m+1,2) and torus links L(2m,2) play the role of the "boundary" of this space. Using the holographic principle, we find the…

几何拓扑 · 数学 2015-11-17 A. M. Pavlyuk

In this research paper, weighted / unweighted, directed / undirected graphs are associated with interesting Discrete Time Markov Chains (DTMCs) as well as Continuous Time Markov Chains (CTMCs). The equilibrium / transient behaviour of such…

数据结构与算法 · 计算机科学 2012-09-18 Garimella Rama Murthy

The Jones polynomial and the Kauffman bracket are constructed, and their relation with knot and link theory is described. The quantum groups and tangle functor formalisms for understanding these invariants and their descendents are given.…

q-alg · 数学 2008-02-03 Stephen Sawin

We consider two notions describing how one finite graph may be larger than another. Using them, we prove several theorems for such pairs that compare the number of spanning trees, the return probabilities of random walks, and the number of…

组合数学 · 数学 2018-09-10 Russell Lyons

We study the enumeration of alternating links and tangles, considered up to topological (flype) equivalences. A weight $n$ is given to each connected component, and in particular the limit $n\to 0$ yields information about (alternating)…

数学物理 · 物理学 2007-05-23 J. L. Jacobsen , P. Zinn-Justin

By natural way the hierarchy structure is introduced on directed graphs with weighted adjacencies. Embedded system of algebras of subsets of the set of vertices of such digraph and it's consolidations, which vertices are the elementary sets…

组合数学 · 数学 2007-05-23 V. A. Buslov

We establish inequalities that constrain the genera of smooth cobordisms between knots in 4-dimensional cobordisms. These "relative adjunction inequalities" improve the adjunction inequalities for closed surfaces which have been…

几何拓扑 · 数学 2021-08-10 Matthew Hedden , Katherine Raoux

Cosmic strings in the early universe have received revived interest in recent years. In this paper we derive these structures as topological defects from singular distributions of the quintessence field of dark energy. Our emphasis is…

高能物理 - 理论 · 物理学 2017-11-22 Xinfei Li , Xin Liu , Yong-Chang Huang

Spin networks, essentially labeled graphs, are ``good quantum numbers'' for the quantum theory of geometry. These structures encompass a diverse range of techniques which may be used in the quantum mechanics of finite dimensional systems,…

广义相对论与量子宇宙学 · 物理学 2009-10-31 Seth A. Major

We construct graph-valued analogues of the Kuperberg sl(3) and G2 invariants for virtual knots. The restriction of the sl(3) or G2 invariants for classical knots coincides with the usual Homflypt sl(3) invariant and G2 invariants. For…

几何拓扑 · 数学 2014-07-11 Louis Hirsch Kauffman , Vassily Olegovich Manturov

Polyak showed that any Milnor's $\overline{\mu}$-invariant of length 3 can be represented as a combination of Conway polynomials of knots obtained by certain band sum of the link components. On the other hand, Habegger and Lin showed that…

几何拓扑 · 数学 2016-08-22 Yuka Kotorii

This survey explores knot polynomials and their categorification, culminating in the homological invariants of knots. We begin with an overview of classical knot polynomials, progressing towards the superpolynomial and its role in unifying…

几何拓扑 · 数学 2025-06-13 Shivrat Sachdeva

Classical knot theory deals with {\em diagrams} and {\em invariants}. By means of horizontal {\em trisecants}, we construct a new theory of classical braids with invariants valued in {\em pictures}. These pictures are closely related to…

几何拓扑 · 数学 2015-01-22 Vassily Olegovich Manturov

The observed output of an interferometer is the result of interference among the parts of the input light beam traveling along each possible optical path. In complex systems, writing down all these possible optical paths and computing their…

量子物理 · 物理学 2020-06-16 Bruno Melo , Igor Brandão , Carlos Tomei , Thiago Guerreiro

We propose a random bipartite graph with weights assigned to both parts of the vertex sets. Edges are formed independently with probabilities that depend on these weights. This bipartite graph naturally gives rise to a random intersection…

概率论 · 数学 2025-06-10 Alastair Haig , Minmin Wang

This article provides an overview of relative strengths of polynomial invariants of knots and links, such as the Alexander, Jones, Homflypt, Kaufman two-variable polynomial, and Khovanov polynomial.

几何拓扑 · 数学 2012-10-03 Slavik Jablan , Ljiljana Radovic
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