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We study the coarsening of strongly microphase separated membrane domains in the presence of recycling of material. We study the dynamics of the domain size distribution under both scale-free and size-dependent recycling. Closed form…

亚细胞过程 · 定量生物学 2018-05-11 S. Alex Rautu , G. Rowlands , M. S. Turner

Cell membranes are out of thermodynamic equilibrium notably because of membrane recycling, i.e. active exchange of material with the cytosol. We propose an analytically tractable model of biomembrane predicting the effects of recycling on…

软凝聚态物质 · 物理学 2016-04-18 Mareike Berger , Manoel Manghi , Nicolas Destainville

In a cellular medium, the plasmic membrane is a place of interactions between the cell and its direct external environment. A classic model describes it as a fluid mosaic. The fluid phase of the membrane allows a lateral degree of freedom…

概率论 · 数学 2013-09-24 Aimé Lachal

The formation of microdomains, also called rafts, in biomembranes can be attributed to the surface tension of the membrane. In order to model this phenomenon, a model involving a coupling between the local composition and the local…

偏微分方程分析 · 数学 2016-06-29 Irene Fonseca , Gurgen Hayrapetyan , Giovanni Leoni , Barbara Zwicknagl

In experiments on model membranes, a formation of large domains of different lipid composition is readily observed. However, no such phase separation is observed in the membranes of intact cells. Instead, a structure of small transient…

软凝聚态物质 · 物理学 2017-08-23 Timo Fischer , H. Jelger Risselada , Richard L. C. Vink

The formation of dynamical clusters of proteins is ubiquitous in cellular membranes and is in part regulated by the recycling of membrane components. Mean-field models of out-of-equilibrium cluster formation with recycling predict a broad…

软凝聚态物质 · 物理学 2014-02-27 Quentin Vagne , Matthew S. Turner , Pierre Sens

Activity or spin patterns on random scale-free network are studied by mean field analysis and computer simulations. These activity patterns evolve in time according to local majority-rule dynamics which is implemented using (i) parallel or…

无序系统与神经网络 · 物理学 2007-05-23 Haijun Zhou , Reinhard Lipowsky

Sinai's model of diffusion in one-dimension with random local bias is studied by a real space renormalization group which yields asymptotically exact long time results. The distribution of the position of a particle and the probability of…

凝聚态物理 · 物理学 2009-10-30 Daniel Fisher , Pierre Le Doussal , Cecile Monthus

Motivated by experimental observations of patterning at the leading edge of motile eukaryotic cells, we introduce a general model for the dynamics of nearly-flat fluid membranes driven from within by an ensemble of activators. We include,…

统计力学 · 物理学 2022-02-09 Francesco Cagnetta , Viktor Skultety , Martin R. Evans , Davide Marenduzzo

Using a combination of theory and experiments we study the interface between two immiscible domains in a colloidal membrane composed of rigid rods of different lengths. Geometric considerations of rigid rod packing imply that a domain of…

Non-motile elongated bacteria confined in two-dimensional open micro-channels can exhibit collective motion and form dense monolayers with nematic order if the cells proliferate, i.e., grow and divide. Using soft molecular dynamics…

软凝聚态物质 · 物理学 2013-07-25 Sirio Orozco-Fuentes , Denis Boyer

According to the lipid raft hypothesis, biological lipid membranes are laterally heterogeneous and filled with nanoscale ordered "raft" domains, which are believed to play an important role for the organization of proteins in membranes.…

生物物理 · 物理学 2013-03-22 Sebastian Meinhardt , Richard L. C. Vink , Friederike Schmid

The recent discovery of a lateral organization in cell membranes due to small structures called 'rafts' has motivated a lot of biological and physico-chemical studies. A new experiment on a model system has shown a spectacular budding…

亚细胞过程 · 定量生物学 2009-11-10 Jean-Marc Allain , Martine Ben Amar

Recurrence networks are a novel tool of nonlinear time series analysis allowing the characterisation of higher-order geometric properties of complex dynamical systems based on recurrences in phase space, which are a fundamental concept in…

混沌动力学 · 物理学 2016-04-07 Y. Zou , J. Heitzig , R. V. Donner , J. F. Donges , J. D. Farmer , R. Meucci , S. Euzzor , N. Marwan , J. Kurths

Non-equilibrium dynamics of classical random Ising spin chains are studied using asymptotically exact real space renormalization group. Specifically the random field Ising model with and without an applied field (and the Ising spin glass…

凝聚态物理 · 物理学 2009-10-31 Daniel S. Fisher , Pierre Le Doussal , Cecile Monthus

The distribution of inclusion-rich domains in membranes with active two-state inclusions is studied by simulations. Our study shows that typical size of inclusion-rich domains ($L$) can be controlled by inclusion activities in several ways.…

亚细胞过程 · 定量生物学 2009-11-13 Chien-Hsun Chen , Hsuan-Yi Chen

Cellular membranes are a heterogeneous mix of lipids, proteins and small molecules. Special groupings of saturated lipids and cholesterol form a liquid-ordered phase, known as `lipid rafts,' serving as platforms for signaling, trafficking…

定量方法 · 定量生物学 2015-05-13 Tristan S. Ursell , William S. Klug , Rob Phillips

We propose a model that leads to the formation of non-equilibrium finite-size domains in a biological membrane. Our model considers the active conformational change of the inclusions and the coupling between inclusion density and membrane…

软凝聚态物质 · 物理学 2007-05-23 Chien-Hsun Chen

Biological membranes are host to proteins and molecules which may form domain-like structures resulting in spatially-varying material properties. Vesicles with such heterogeneous membranes can exhibit intricate shapes at equilibrium and…

软凝聚态物质 · 物理学 2023-06-22 Prerna Gera , David Salac , Saverio E. Spagnolie

We investigate joint spectral characteristics of a family of matrices $\mathcal F $, associated with products in the semigroup generated by $\mathcal F$. In the literature, extremal measures such as the well-known joint spectral radius and…

动力系统 · 数学 2026-04-27 Francesco Paolo Maiale , Anastasiia Trofimova , Nicola Guglielmi
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