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We analyze the mathematical properties of a multi-species biofilm cross-diffusion model together with very general reaction terms and mixed Dirichlet-Neumann boundary conditions on a bounded domain. This model belongs to the class of…

偏微分方程分析 · 数学 2018-05-08 Esther S. Daus , Josipa-Pina Milišić , Nicola Zamponi

We study semi-linear elliptic PDEs with polynomial non-linearity and provide a probabilistic representation of their solution using branching diffusion processes. When the non-linearity involves the unknown function but not its derivatives,…

概率论 · 数学 2018-02-15 Ankush Agarwal , Julien Claisse

The dynamics of pulse solutions in a bistable reaction-diffusion system are studied analytically by reducing partial differential equations (PDEs) to finite-dimensional ordinary differential equations (ODEs). For the reduction, we apply the…

动力系统 · 数学 2019-07-24 Kei Nishi , Yasumasa Nishiura , Takashi Teramoto

Known as one of the hallmarks of cancer [30], cancer cell invasion of human body tissue is a complicated spatio-temporal multiscale process which enables a localised solid tumour to transform into a systemic, metastatic and fatal disease.…

动力系统 · 数学 2016-03-25 Lu Peng , Dumitru Trucu , Ping Lin , Alastair Thompson , Mark A. J. Chaplain

We present multiscale models of cancer tumor invasion with components at the molecular, cellular, and tissue levels. We provide biological justifications for the model components, present computational results from the model, and discuss…

定量方法 · 定量生物学 2023-02-14 Bruce P. Ayati , Glenn F. Webb , Alexander R. A. Anderson

An oxidation process is simulated for a bundle of metal tubes in a cross-flow. A fluid flow is governed by the incompressible Navier-Stokes equations. To describe the transport of oxygen, the corresponding convection-diffusion equation is…

计算工程、金融与科学 · 计算机科学 2017-08-15 Alexander G. Churbanov , Oleg Iliev , Valery F. Strizhov , Petr N. Vabishchevich

In this paper, we study a well-posedness problem on a new mathematical model for cancer invasion within the plasminogen activation system, which explicitly incorporates cooperation with host normal cells. Key biological…

偏微分方程分析 · 数学 2025-12-15 Guanjun Pan , Hong-Ming Yin

This paper develops methods of distributed Bayesian hypothesis tests for fault detection and diagnosis that are based on belief propagation and optimization in graphical models. The main challenges in developing distributed statistical…

系统与控制 · 计算机科学 2015-01-20 Kwang-Ki K. Kim

At present it is still quite difficult to match the vast knowledge on the behavior of individual tumor cells with macroscopic measurements on clinical tumors. On the modeling side, we already know how to deal with many molecular pathways…

组织与器官 · 定量生物学 2012-01-16 Roberto Chignola , Edoardo Milotti

Diffusion processes are fundamental in modelling stochastic dynamics in natural sciences. Recently, simulating such processes on complicated geometries has found applications for example in biology, where toroidal data arises naturally when…

概率论 · 数学 2019-06-25 Mathias Højgaard Jensen , Anton Mallasto , Stefan Sommer

Developments in dynamical systems theory provides new support for the macroscale modelling of pdes and other microscale systems such as Lattice Boltzmann, Monte Carlo or Molecular Dynamics simulators. By systematically resolving subgrid…

数值分析 · 数学 2012-01-18 A. J. Roberts , Tony MacKenzie , J. E. Bunder

We introduce a model for the mass transfer of molecular activators and inhibitors in two media separated by an interface, and study its interaction with the deformations exhibited by the two-layer skin tissue where they occur. The…

Augmenting mechanistic ordinary differential equation (ODE) models with machine-learnable structures is an novel approach to create highly accurate, low-dimensional models of engineering systems incorporating both expert knowledge and…

动力系统 · 数学 2022-06-22 Sandor Beregi , David A. W. Barton , Djamel Rezgui , Simon A. Neild

Real-world deployment of computer vision systems, including in the discovery processes of biomedical research, requires causal representations that are invariant to contextual nuisances and generalize to new data. Leveraging the internal…

计算机视觉与模式识别 · 计算机科学 2023-06-22 Wolfgang M. Pernice , Michael Doron , Alex Quach , Aditya Pratapa , Sultan Kenjeyev , Nicholas De Veaux , Michio Hirano , Juan C. Caicedo

We consider a cross-diffusion system for which the diffusion of each species is governed solely by the aggregate density through a pressure law of logarithmic or fast diffusion type. The model is set over a one dimensional bounded interval,…

偏微分方程分析 · 数学 2026-03-20 Alpár R. Mészáros , Guy Parker

A method to construct the exact solution of the PDE is presents, which combines the two kind methods(the nonlinear transformation and RQ(Reduction the PDE to a Quadrature problem) method).The nonlinear diffusion equation is chosen to…

混沌动力学 · 物理学 2007-05-23 Yang Lei , Liu Jianbin , Yang Kongqing

With the increasingly available large-scale cancer genomics datasets, machine learning approaches have played an important role in revealing novel insights into cancer development. Existing methods have shown encouraging performance in…

基因组学 · 定量生物学 2021-12-01 Tong Chen , Sheng Wang

This study introduces a novel point-wise diffusion model that processes spatio-temporal points independently to efficiently predict complex physical systems with shape variations. This methodological contribution lies in applying forward…

计算物理 · 物理学 2025-08-05 Jiyong Kim , Sunwoong Yang , Namwoo Kang

The Wireless Capsule Endoscopy (WCE) is becoming a popular way of screening gastrointestinal system diseases and cancer. However, the time-consuming process in inspecting WCE data limits its applications and increases the cost of…

计算机视觉与模式识别 · 计算机科学 2018-09-10 Xiaolu Zhang , Shiwan Zhao , Lingxi Xie

We consider nonlinear partial differential equations (PDEs) for advection-diffusion processes which are augmented by an auxiliary parameter $\delta$ such that $\delta=0$ corresponds to linear advection-diffusion. We derive potentially…

偏微分方程分析 · 数学 2025-12-16 T. Forrest Kieffer , Jakob Cupp , John S. Van Dyke , Paraj Titum , Michael L. Wall