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This note presents a simulation method for investigating the relationship between porosity and particle size distribution in porous media characterization. The method simulates particle packing based on particle size distributions,…

软凝聚态物质 · 物理学 2024-09-25 Yuhe Wang

We propose a two-scale model to resolve essential features of developmental tissue deformations. The model couples individual cellular behavior to the mechanics at tissue scale. This is realized by a multiphase-field model addressing the…

软凝聚态物质 · 物理学 2025-06-25 Lea Happel , Axel Voigt

This paper presents a mathematical analysis of an elliptic partial differential equation (PDE) designed to compute the geometric thickness of a given shape. The PDE-based formulation provides a direct and systematic approach to evaluate…

偏微分方程分析 · 数学 2025-11-18 Atsushi Nakayasu , Takayuki Yamada

We propose a new model that describes the dynamics of epidemic spreading on connected graphs. Our model consists in a PDE-ODE system where at each vertex of the graph we have a standard SIR model and connexions between vertices are given by…

偏微分方程分析 · 数学 2020-11-25 Christophe Besse , Grégory Faye

An analysis of traveling wave solutions of partial differential equation (PDE) systems with cross-diffusion is presented. The systems under study fall in a general class of the classical Keller-Segel models to describe chemotaxis. The…

数值分析 · 计算机科学 2007-06-08 Faina Berezovskaya , Artem Novozhilov , Georgy Karev

We consider a multiscale approach based on immersed methods for the efficient computational modeling of tissues composed of an elastic matrix (in two or three-dimensions) and a thin vascular structure (treated as a co-dimension two…

数值分析 · 数学 2021-11-18 Luca Heltai , Alfonso Caiazzo

Continuum mathematical models for collective cell motion normally involve reaction-diffusion equations, such as the Fisher-KPP equation, with a linear diffusion term to describe cell motility and a logistic term to describe cell…

生物物理 · 物理学 2019-07-24 Scott W McCue , Wang Jin , Timothy J Moroney , Kai-Yin Lo , Shih-En Chou , Matthew J Simpson

We establish several bounds for solutions to elliptic/parabolic cross-diffusion systems of $m$ equations ($m\ge2$) on 2d/3d domains $\Og$. We settle the existence and global existence problems in these cases and also provide new…

偏微分方程分析 · 数学 2023-08-24 Dung Le

Coupled partial differential equation (PDE) systems, which often represent multi-physics models, are naturally suited for modular numerical solution methods. However, several challenges yet remain in extending the benefits of modularization…

数值分析 · 数学 2014-10-21 Akshay Mittal , Gianluca Iaccarino

In this paper, a class of reaction-diffusion equations for Multiple Sclerosis is presented. These models are derived by means of a diffusive limit starting from a proper kinetic description, taking account of the underlying microscopic…

定量方法 · 定量生物学 2026-01-07 Marzia Bisi , Maria Groppi , Giorgio Martalò , Romina Travaglini

Foundation models, such as large language models, have demonstrated success in addressing various language and image processing tasks. In this work, we introduce a multi-modal foundation model for scientific problems, named PROSE-PDE. Our…

机器学习 · 计算机科学 2025-02-04 Jingmin Sun , Yuxuan Liu , Zecheng Zhang , Hayden Schaeffer

We analyse a model that describes the propagation of many pathogens within and between many species. A branching process approximation is used to compute the probability of disease outbreaks. Special cases of aquatic environments with two…

种群与进化 · 定量生物学 2026-05-21 Clotilde Djuikem , Julien Arino

In this work, we present a mathematical model of the initiation and progression of a low-grade urinary bladder carcinoma. We simulate the crucial processes involved in tumor growth, such as oxygen diffusion, carcinogen penetration, and…

定量方法 · 定量生物学 2014-11-11 Svetlana Bunimovich-Mendrazitsky , Vladimir Pisarev , Eugene Kashdan

The motion of a eukaryotic cell presents a variety of interesting and challenging problems from both a modeling and a computational perspective. The processes span many spatial scales (from molecular to tissue) as well as disparate time…

细胞行为 · 定量生物学 2010-11-25 Ben Vanderlei , James J. Feng , Leah Edelstein-Keshet

The global existence and boundedness of solutions to quasi-linear reaction-diffusion systems are investigated. The system arises from compartmental models describing the spread of infectious diseases proposed in [Viguerie et al, Appl. Math.…

偏微分方程分析 · 数学 2024-03-26 Juan Yang , Jeff Morgan , Bao Quoc Tang

A nonlinear cross-diffusion epidemic with a time-dependent Susceptible-Infected-Recovered-Died system is proposed in this paper. This system is derived from kinetic theory model by multiscale approach, which leads to an equivalent system…

种群与进化 · 定量生物学 2021-09-01 Mohamed Zagour

We propose a mathematical model for computing drug release from multi-layer capsules. The diffusion problem in such heterogeneous layer-by-layer composite medium is described by a system of coupled partial differential equations, which we…

医学物理 · 物理学 2017-08-04 Badr Kaoui , Marco Lauricella , Giuseppe Pontrelli

Two algorithms that combine Brownian dynamics (BD) simulations with mean-field partial differential equations (PDEs) are presented. This PDE-assisted Brownian dynamics (PBD) methodology provides exact particle tracking data in parts of the…

计算物理 · 物理学 2012-06-27 Benjamin Franz , Mark B. Flegg , S. Jonathan Chapman , Radek Erban

In this paper a new approach is derived in the context of shape theory. The implemented methodology is motivated in an open problem proposed in \citet{GM93} about the construction of certain shape density involving Euler hypergeometric…

统计理论 · 数学 2015-02-04 Francisco J. Caro-Lopera , José A. Díaz-García

We propose a model for cell polarization as a response to an external signal which results in a system of PDEs for different variants of a protein on the cell surface and interior respectively. We study stationary states of this model in…

偏微分方程分析 · 数学 2019-02-18 Barbara Niethammer , Matthias Röger , Juan J. L. Velázquez