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Protein phosphorylation cycles are important mechanisms of the post translational modification of a protein and as such an integral part of intracellular signaling and control. We consider the sequential phosphorylation and…

分子网络 · 定量生物学 2019-11-06 Carsten Conradi , Elisenda Feliu , Maya Mincheva

Phosphorylation networks, representing the mechanisms by which proteins are phosphorylated at one or multiple sites, are ubiquitous in cell signalling and display rich dynamics such as unlimited multistability. Dual-site phosphorylation…

动力系统 · 数学 2024-05-28 Elisenda Feliu , Nidhi Kaihnsa

This work investigates the emergence of oscillations in one of the simplest cellular signaling networks exhibiting oscillations, namely, the dual-site phosphorylation and dephosphorylation network (futile cycle), in which the mechanism for…

分子网络 · 定量生物学 2019-02-05 Carsten Conradi , Maya Mincheva , Anne Shiu

Autonomous sustained oscillations are ubiquitous in living and nonliving systems. As open systems, far from thermodynamic equilibrium, they defy entropic laws which mandate convergence to stationarity. We present structural conditions on…

动力系统 · 数学 2020-01-07 Bernold Fiedler

For many physical systems the transition from a stationary solution to sustained small amplitude oscillations corresponds to a Hopf bifurcation. For systems involving impacts, thresholds, switches, or other abrupt events, however, this…

动力系统 · 数学 2019-05-07 David J. W. Simpson

Deciding whether and where a system of parametrized ordinary differential equations displays bistability, that is, has at least two asymptotically stable steady states for some choice of parameters, is a hard problem. For systems modeling…

分子网络 · 定量生物学 2020-08-31 Angélica Torres , Elisenda Feliu

We investigate the steady-state solution and its bifurcations in time-delay systems with band-limited feedback. This is a first step in a rigorous study concerning the effects of AC-coupled components in nonlinear devices with time-delayed…

混沌动力学 · 物理学 2009-11-11 Lucas Illing , Daniel J. Gauthier

Real power systems exhibit dynamics that evolve across a wide range of time scales, from very fast to very slow phenomena. Historically, incorporating these wide-ranging dynamics into a single model has been impractical. As a result, power…

系统与控制 · 电气工程与系统科学 2025-10-29 Luis David Pabon Ospina , Martin Braun , Sushobhan Chatterjee , Sijia Geng

A general FitzHugh-Rinzel model, able to describe several neuronal phenomena, is considered. Linear stability and Hopf bifurcations are investigated by means of the spectral equation for the ternary autonomous dynamical system and the…

混沌动力学 · 物理学 2025-03-04 Monica De Angelis

Based on the generalized Routh-Hurwitz criterion, we propose a sufficient and necessary criterion for testing the stability of fractional-order linear systems with order {\alpha}{\in}[1,2), called the fractional-order Routh-Hurwitz…

动力系统 · 数学 2022-02-22 Jing Yang , Xiaorong Hou , Yajun Li

Quantifying the stability of an equilibrium is central in the theory of dynamical systems as well as in engineering and control. A comprehensive picture must include the response to both small and large perturbations, leading to the…

适应与自组织系统 · 物理学 2023-03-08 Philipp C. Böttcher , Benjamin Schäfer , Stefan Kettemann , Carsten Agert , Dirk Witthaut

A Hopf bifurcation criterion of fractional-order systems with order 1 < {\alpha} < 2 is established in this paper, in which all conditions are explicitly expressed by parameters without solving the roots of the relevant characteristic…

动力系统 · 数学 2022-02-22 Jing Yang , Xiaoxue Li , Xiaorong Hou

In the design of decentralized networked systems, it is useful to know whether a given network topology can sustain stable dynamics. We consider a basic version of this problem here: given a vector space of sparse real matrices, does it…

最优化与控制 · 数学 2013-04-15 M. -A . Belabbas

This paper aims at extending the criterion that the quasi-stability of a polynomial is equivalent to the total nonnegativity of its Hurwitz matrix. We give a complete description of functions generating doubly infinite series with totally…

复变函数 · 数学 2017-05-25 Alexander Dyachenko

Ordered distributive double phosphorylation is a recurrent motif in intracellular signaling and control. It is either sequential (where the site phosphorylated last is dephosphorylated first) or cyclic (where the site phosphorylated first…

分子网络 · 定量生物学 2024-02-09 Carsten Conradi , Maya Mincheva

In this work, we conduct a rigorous analysis on the dynamics of a predator-prey model with cooperative predation. From the root classification of an algebraic equation, we derive existence criteria of the positive equilibria. By Jacobian…

经典分析与常微分方程 · 数学 2021-08-24 Srijana Ghimire , Xiang-Sheng Wang

We review some properties of dynamical systems with slowly varying parameters, when a parameter is moved through a bifurcation point of the static system. Bifurcations with a single zero eigenvalue may create hysteresis cycles, whose area…

chao-dyn · 物理学 2009-10-31 N. Berglund

A four-dimensional mathematical model of the hypothalamus-pituitary-adrenal (HPA) axis is investigated, incorporating the influence of the GR concentration and general feedback functions. The inclusion of distributed time delays provides a…

动力系统 · 数学 2018-12-26 Eva Kaslik , Mihaela Neamtu

On a two-dimensional circular domain, we analyze the formation of spatio-temporal patterns for a class of coupled bulk-surface reaction-diffusion models for which a passive diffusion process occurring in the interior bulk domain is linearly…

斑图形成与孤子 · 物理学 2020-08-11 Frédéric Paquin-Lefebvre , Wayne Nagata , Michael J. Ward

We consider a broad class of second-order dynamical systems and study the impact of damping as a system parameter on the stability, hyperbolicity, and bifurcation in such systems. We prove a monotonic effect of damping on the hyperbolicity…

动力系统 · 数学 2022-03-23 Amin Gholami , X. Andy Sun
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