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Reaction networks taken with mass-action kinetics arise in many settings, from epidemiology to population biology to systems of chemical reactions. Bistable reaction networks are posited to underlie biochemical switches, which motivates the…

动力系统 · 数学 2016-09-20 Badal Joshi , Anne Shiu

We characterize completely the capacity for (nondegenerate) multistationarity of mass action reaction networks with one-dimensional stoichiometric subspace in terms of reaction structure. Specifically, we show that networks with two or more…

动力系统 · 数学 2022-08-15 Casian Pantea , Galyna Voitiuk

Chemical reaction systems are dynamical systems that arise in chemical engineering and systems biology. In this work, we consider the question of whether the minimal (in a precise sense) multistationary chemical reaction networks, which we…

动力系统 · 数学 2012-07-10 Badal Joshi , Anne Shiu

We study the multistationarity for the reaction networks with one-dimensional stoichiometric subspaces, and we focus on the networks admitting finitely many positive steady states. We prove that if a network admits multistationarity, then…

动力系统 · 数学 2021-08-24 Kexin Lin , Xiaoxian Tang , Zhishuo Zhang

Which reaction networks, when taken with mass-action kinetics, have the capacity for multiple steady states? There is no complete answer to this question, but over the last 40 years various criteria have been developed that can answer this…

动力系统 · 数学 2015-08-21 Badal Joshi , Anne Shiu

For reaction networks arising in systems biology, the capacity for two or more steady states, that is, multistationarity, is an important property that underlies biochemical switches. Another property receiving much attention recently is…

概率论 · 数学 2023-01-26 Badal Joshi , Nidhi Kaihnsa , Tung D. Nguyen , Anne Shiu

This work addresses multistationarity of fully open reaction networks equipped with mass action kinetics. We improve upon the existing results relating existence of positive feedback loops in a reaction network and multistationarity; and we…

分子网络 · 定量生物学 2025-11-11 Shenghao Yao , AmirHosein Sadeghimanesh , Matthew England

This work addresses whether a reaction network, taken with mass-action kinetics, is multistationary, that is, admits more than one positive steady state in some stoichiometric compatibility class. We build on previous work on the effect…

分子网络 · 定量生物学 2019-08-27 AmirHosein Sadeghimanesh , Elisenda Feliu

Many dynamical systems arising in biology and other areas exhibit multistationarity (two or more positive steady states with the same conserved quantities). Although deciding multistationarity for a polynomial dynamical system is an…

分子网络 · 定量生物学 2019-02-08 Alicia Dickenstein , Mercedes Perez Millan , Anne Shiu , Xiaoxian Tang

This article characterizes certain small multistationary chemical reaction networks. We consider the set of fully open networks, those for which all chemical species participate in inflow and outflow, containing one non-flow (reversible or…

动力系统 · 数学 2013-01-18 Badal Joshi

Biochemical models that exhibit bistability are of interest to biologists and mathematicians alike. Chemical reaction network theory can provide sufficient conditions for the existence of bistability, and on the other hand can rule out the…

动力系统 · 数学 2008-04-28 Anne Shiu

A multistationarity region is the part of a reaction network's parameter space that gives rise to multiple steady states. Mathematically, this region consists of the positive parameters for which a parametrized family of polynomial…

动力系统 · 数学 2024-04-08 Allison McClure , Anne Shiu

For three typical sets of small reaction networks (networks with two reactions, one irreversible and one reversible reaction, or two reversible-reaction pairs), we completely answer the challenging question: what is the smallest subset of…

分子网络 · 定量生物学 2021-01-29 Xiaoxian Tang , Hao Xu

Zero-one biochemical reaction networks play key roles in cell signalling such as signalling pathways regulated by protein phosphorylation. Multistability of reaction networks is a crucial dynamics feature enabling decision-making in cells.…

动力系统 · 数学 2024-12-20 Yue Jiao , Xiaoxian Tang , Xiaowei Zeng

We solve a conjecture on multiple nondegenerate steady states, and prove bistability for sequestration networks. More specifically, we prove that for any odd number of species, and for any production factor, the fully open extension of a…

动力系统 · 数学 2019-06-04 Xiaoxian Tang , Jie Wang

Bistability and multistationarity are properties of reaction networks linked to switch-like responses and connected to cell memory and cell decision making. Determining whether and when a network exhibits bistability is a hard and open…

代数几何 · 数学 2018-12-20 Elisenda Feliu , Martin Helmer

Many reaction networks arising in applications are multistationary, that is, they have the capacity for more than one steady state; while some networks exhibit absolute concentration robustness (ACR), which means that some species…

动力系统 · 数学 2024-11-20 Nidhi Kaihnsa , Tung Nguyen , Anne Shiu

Chemical reaction network theory is a field of applied mathematics concerned with modeling chemical systems, and can be used in other contexts such as in systems biology to study cellular signaling pathways or epidemiology to study the…

We provide a sufficient and necessary condition in terms of the stoichiometric coefficients for a bi-reaction network to admit multistability. Also, this result completely characterizes the bi-reaction networks according to if they admit…

动力系统 · 数学 2024-05-09 Yixuan Liang , Xiaoxian Tang , Qian Zhang

In networked systems, the interplay between the dynamics of individual subsystems and their network interactions has been found to generate multistability in various contexts. Despite its ubiquity, the specific mechanisms and ingredients…

动力系统 · 数学 2024-11-22 Kalel L. Rossi , Everton S. Medeiros , Peter Ashwin , Ulrike Feudel
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