相关论文: On the phylogeny graphs of degree-bounded digraphs
An acyclic digraph each vertex of which has indegree at most $i$ and outdegree at most $j$ is called an $(i, j)$ digraph for some positive integers $i$ and $j$. Lee {\it et al.} (2017) studied the phylogeny graphs of $(2, 2)$ digraphs and…
An acyclic digraph in which every vertex has indegree at most $i$ and outdegree at most $j$ is called an $(i,j)$ digraph for some positive integers $i$ and $j$. The phylogeny graph of a digraph $D$ has $V(D)$ as the vertex set and an edge…
If each vertex of an acyclic digraph has indegree at most $i$ and outdegree at most $j$, then it is called an $(i,j)$ digraph, which was introduced by Hefner~{\it et al.}~(1991). Whereas Hefner~{\it et al.} characterized $(i,j)$ digraphs…
Given an acyclic digraph $D$, the competition graph of $D$, denoted by $C(D)$, is the simple graph having vertex set $V(D)$ and edge set $\{uv \mid (u, w), (v, w) \in A(D) \text{ for some } w \in V(D) \}$. The phylogeny graph of an acyclic…
The competition graph of a doubly partial order is known to be an interval graph. The CCE graph and the niche graph of a doubly partial order are also known to be interval graphs if the graphs do not contain a cycle of length four and three…
The competition-common enemy graph (CCE graph) of a digraph $D$ is the graph with the vertex set $V(D)$ and an edge $uv$ if and only if $u$ and $v$ have a common predator and a common prey in $D$. If each vertex of a digraph $D$ has…
Competition graphs were created in connected to a biological model as a means of reflecting the competition relations among the predators in the food webs and determining the smallest dimension of ecological phase space. In 2011, Factor and…
A hole in a graph is an induced subgraph which is a cycle of length at least four. A graph is chordal if it contains no holes. Following McKee and Scheinerman (1993), we define the chordality of a graph $G$ to be the minimum number of…
Recent investigations in computational biology have focused on a family of 2-colored digraphs, called 2-colored best match graphs, which naturally arise from rooted phylogenetic trees. Actually the defining properties of such graphs are…
Mixed graphs can be seen as digraphs with arcs and edges (or digons, that is, two opposite arcs). In this paper, we consider the case where such graphs are bipartite and in which the undirected and directed degrees are one. The best graphs,…
In Chapter 1 we fully characterise pairs of finite graphs which form a gap in the full homomorphism order. This leads to a simple proof of the existence of generalised duality pairs. We also discuss how such results can be carried to…
An $acyclic$ edge coloring of a graph is a proper edge coloring such that there are no bichromatic cycle s. The \emph{acyclic chromatic index} of a graph is the minimum number k such that there is an acyclic e dge coloring using k colors…
Euler graphs are characterized by the simple criterion that degree of each node is even. By restricting on the cycle types yet additional intrinsic properties of Euler graphs are unveiled. For example, regularity higher than degree two is…
Phylogenetic networks are a type of directed acyclic graph that represent how a set $X$ of present-day species are descended from a common ancestor by processes of speciation and reticulate evolution. In the absence of reticulate evolution,…
Chordal graphs are the graphs in which every cycle of length at least four has a chord. A set $S$ is a vertex separator for vertices $a$ and $b$ if the removal of $S$ of the graph separates $a$ and $b$ into distinct connected components. A…
Let $D=(V,A)$ be an acyclic digraph. For $x\in V$ define $e_{_{D}}(x)$ to be the difference of the indegree and the outdegree of $x$. An acyclic ordering of the vertices of $D$ is a one-to-one map $g: V \rightarrow [1,|V|] $ that has the…
There are typically several nonisomorphic graphs having a given degree sequence, and for any two degree sequence terms it is often possible to find a realization in which the corresponding vertices are adjacent and one in which they are…
We extend the study of link-irregular graphs to directed graphs (digraphs), where a digraph is link-irregular if no two vertices have isomorphic directed links. We establish that link-irregular digraphs exist on $n$ vertices if and only if…
Bayesian networks are a widely-used class of probabilistic graphical models capable of representing symmetric conditional independence between variables of interest using the topology of the underlying graph. For categorical variables, they…
Degree ssortativity is the tendency for nodes of high degree (resp.low degree) in a graph to be connected to high degree nodes (resp. to low degree ones). It is sually quantified by the Pearson correlation coefficient of the degree-degree…