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We perform a compare-and-contrast investigation between the equilibrium shapes of physical and ideal trefoil knots, both in closed and open configurations. Ideal knots are purely geometric abstractions for the tightest configuration tied in…

软凝聚态物质 · 物理学 2021-02-05 Paul Johanns , Paul Grandgeorge , Changyeob Baek , Tomohiko G. Sano , John H. Maddocks , Pedro M. Reis

The main result of this paper is a negative answer to the question: are all transversal knot types transversally simple? An explicit infinite family of examples is given of closed 3-braids that define transversal knot types that are not…

几何拓扑 · 数学 2009-03-02 Joan S Birman , William W Menasco

A {\it stuck knot} is a knot diagram containing designated crossings, called {\it stuck crossings}, whose incident strands are required to remain locally non-separable. These rigidity constraints restrict the allowable ambient isotopies and…

几何拓扑 · 数学 2026-02-23 Ioannis Diamantis

In this paper, we study a special family of $(1,1)$ knots called constrained knots, which includes 2-bridge knots in the 3-sphere $S^3$ and simple knots in lens spaces. Constrained knots are parameterized by five integers and characterized…

几何拓扑 · 数学 2023-06-14 Fan Ye

It has been suggested recently that knots might exist as stable soliton solutions in a simple three-dimensional classical field theory, opening up a wide range of possible applications in physics and beyond. We have re-examined and extended…

高能物理 - 理论 · 物理学 2008-11-26 Richard A. Battye , Paul M. Sutcliffe

In this paper we show how to realize all knot (and link) types as C^{2} smooth curves of constant curvature. Our proof is constructive: we build the knots with copies of a fixed finite number of "building blocks" that are particular…

几何拓扑 · 数学 2007-05-23 Jenelle Marie McAtee

We present a methodology to simulate the mechanics of knots in elastic rods using geometrically nonlinear, full three-dimensional (3D) finite element analysis. We focus on the mechanical behavior of knots in tight configurations, for which…

软凝聚态物质 · 物理学 2021-02-03 Changyeob Baek , Paul Johanns , Tomohiko G. Sano , Paul Grandgeorge , Pedro M. Reis

The energy minimization problem associated to uniform, isotropic, linearly elastic rods leads to a geometric variational problem for the rod centerline, whose solutions include closed, knotted curves. We give a complete description of the…

微分几何 · 数学 2007-05-23 Thomas A. Ivey , David A. Singer

We study the equilibrium shapes of prime and composite knots confined to two dimensions. Using rigorous scaling arguments we show that, due to self-avoiding effects, the topological details of prime knots are localised on a small portion of…

统计力学 · 物理学 2013-01-24 Ralf Metzler , Andreas Hanke , Paul G. Dommersnes , Yacov Kantor , Mehran Kardar

Semiflexible polymers are widely used as a paradigm for understanding structural phases in biomolecules including folding of proteins. Here, we compare bead-spring and bead-stick variants of coarse-grained semiflexible polymer models that…

软凝聚态物质 · 物理学 2024-02-16 Wolfhard Janke , Suman Majumder , Martin Marenz , Subhajit Paul

The most tight conformations of prime knots are found with the use of the SONO algorithm. Their curvature and torsion profiles are calculated. Symmetry of the knots is analysed. Connections with the physics of polymers are discussed.

计算物理 · 物理学 2009-11-07 P. Pieranski , S. Przybyl , A. Stasiak

In this paper we are interested in BB knots, namely knots and links where the bridge index equals the braid index. Supported by observations from experiments, it is conjectured that BB knots possess a special geometric/physical property…

几何拓扑 · 数学 2021-08-27 Yuanan Diao , Claus Ernst , Philipp Reiter

Given a knot in $S^3$, one can associate to it a surface diffeomorphism in two different ways. First, an arbitrary knot in $S^{3}$ can be represented by braids, which can be thought of as diffeomorphisms of punctured disks. Second, if the…

Semiflexible polymer models are widely used as a paradigm to understand structural phases in biomolecules including folding of proteins. Since stable knots are not so common in real proteins, the existence of stable knots in semiflexible…

软凝聚态物质 · 物理学 2021-07-14 Suman Majumder , Martin Marenz , Subhajit Paul , Wolfhard Janke

Chain molecules play important roles in industry and in living cells. Our focus here is on distinct ways of modeling the stiffness inherent in a chain molecule. We consider three types of stiffnesses -- one yielding an energy penalty for…

软凝聚态物质 · 物理学 2019-11-12 Tatjana Skrbic , Jayanth R. Banavar , Achille Giacometti

Knots across various length scales, from micro to macro-scales, such as polymers, DNA, shoelaces, and surgery, serving their unique mechanical properties. The shape of ideal knots has been extensively studied in the context of knot theory,…

软凝聚态物质 · 物理学 2025-07-01 Taiki Goto , Shunsuke Nomura , Tomohiko G. Sano

We discuss a semi-implicit numerical scheme that allows for minimizing the bending energy of curves within certain isotopy classes. To this end we consider a weighted sum of the bending energy and the tangent-point functional. Based on…

数值分析 · 数学 2018-04-09 Sören Bartels , Philipp Reiter

Squeezed knots are those knots that appear as slices of genus-minimizing oriented smooth cobordisms between positive and negative torus knots. We show that this class of knots is large and discuss how to obstruct squeezedness. The most…

几何拓扑 · 数学 2025-11-27 Peter Feller , Lukas Lewark , Andrew Lobb

We introduce and begin the study of new knot energies defined on knot diagrams. Physically, they model the internal energy of thin metallic solid tori squeezed between two parallel planes. Thus the knots considered can perform the second…

数学物理 · 物理学 2015-05-28 Oleg Karpenkov , Alexey Sossinsky

In this paper we present a detailed study of \emph{bonded knots} and their related structures, integrating recent developments into a single framework. Bonded knots are classical knots endowed with embedded bonding arcs modeling physical or…

几何拓扑 · 数学 2025-12-09 Ioannis Diamantis , Louis H. Kauffman , Sofia Lambropoulou
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