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The spatial Muller's ratchet is a model introduced by Foutel-Rodier and Etheridge to study the impact of cooperation and competition on the fitness of an expanding asexual population. The model is an interacting particle system consisting…

We prove the existence and uniqueness of a quasi-stationary distribution for three stochastic processes derived from the model of Muller's ratchet. This model was invented with the aim of evaluating the limitations of an asexual…

概率论 · 数学 2024-04-02 Mauro Mariani , Etienne Pardoux , Aurélien Velleret

Muller's ratchet describes the irreversible accumulation of deleterious mutations in asexual populations. In well-mixed populations the speed of fitness decline is exponentially small in the population size, and any positive rate of…

种群与进化 · 定量生物学 2018-09-26 Su-Chan Park , Philipp Klatt , Joachim Krug

Muller's ratchet is a paradigmatic model for the accumulation of deleterious mutations in a population of finite size. A click of the ratchet occurs when all individuals with the least number of deleterious mutations are lost irreversibly…

种群与进化 · 定量生物学 2013-11-20 Jakob J. Metzger , Stephan Eule

We consider the accumulation of deleterious mutations in an asexual population, a phenomenon known as Muller's ratchet, using the continuous time model proposed in Etheridge et all. \cite{epw}. We show that for any parameter $\lambda>0$…

概率论 · 数学 2014-09-22 Julien Audiffren , Etienne Pardoux

Spatial birth-and-death processes with time dependent rates are obtained as solutions to certain stochastic equations. The existence, uniqueness, uniqueness in law and the strong Markov property of unique solutions are proven when the…

概率论 · 数学 2022-04-22 Viktor Bezborodov , Luca Di Persio

A stochastic birth-death competition model for particles with excluded volume is proposed. The particles move, reproduce, and die on a regular lattice. While the death rate is constant, the birth rate is spatially nonlocal and implements…

生物物理 · 物理学 2017-06-29 Nagi Khalil , Cristóbal López , Emilio Hernández-García

We consider an infinite-dimensional system of stochastic differential equations describing the evolution of type frequencies in a large population. The type of an individual is the number of deleterious mutations it carries, where fitness…

概率论 · 数学 2012-10-22 P. Pfaffelhuber , P. R. Staab , A. Wakolbinger

In this paper, we investigate a generalised model of $N$ particles undergoing second-order non-local interactions on a lattice. Our results have applications across many research areas, including the modelling of migration, information…

定量方法 · 定量生物学 2023-01-20 Andrei Sontag , Tim Rogers , Christian A. Yates

Background: The accumulation of deleterious mutations of a population directly contributes to the fate as to how long the population would exist. Muller's ratchet provides a quantitative framework to study the effect of accumulation.…

种群与进化 · 定量生物学 2011-09-22 Shuyun Jiao , Yanbo Wang , Bo Yuan , Ping Ao

We give a general existence result for interacting particle systems with local interactions and bounded jump rates but noncompact state space at each site. We allow for jump events at a site that affect the state of its neighbours. We give…

概率论 · 数学 2008-04-04 Mathew D. Penrose

We study finite particle systems on the one-dimensional integer lattice, where each particle performs a continuous-time nearest-neighbour random walk, with jump rates intrinsic to each particle, subject to an exclusion interaction which…

概率论 · 数学 2024-05-07 Vadim Malyshev , Mikhail Menshikov , Serguei Popov , Andrew Wade

A model is proposed and studied describing an infinite population of point migrants arriving in and departing from $X\subseteq \mathbf{R}^d$, $d\geq 1$. Both these acts occur at random with state-dependent rates. That is, depending on their…

动力系统 · 数学 2020-03-23 Yuri Kozitsky

Motivated by a general principle governing regulation mechanisms in biological cells, we investigate a general interaction scheme between different populations of particles and specific particles, referred to as agents. Assuming that each…

概率论 · 数学 2023-10-10 Vincent Fromion , Philippe Robert , Jana Zaherddine

Background: The accumulation of deleterious mutations of a population directly contributes to the fate as to how long the population would exist, a process often described as Muller's ratchet with the absorbing phenomenon. The key to…

种群与进化 · 定量生物学 2012-09-11 Shuyun Jiao , Ping Ao

We consider a random model of diffusion and coagulation. A large number of small particles are randomly scattered at an initial time. Each particle has some integer mass and moves in a Brownian motion whose diffusion rate is determined by…

概率论 · 数学 2012-08-21 Alan Hammond , Fraydoun Rezakhanlou

Competition between independently arising beneficial mutations is enhanced in spatial populations due to the linear rather than exponential growth of clones. Recent theoretical studies have pointed out that the resulting fitness dynamics is…

种群与进化 · 定量生物学 2014-11-11 Jakub Otwinowski , Joachim Krug

Individual-based models of chemical or biological dynamics usually consider individual entities diffusing in space and performing a birth-death type dynamics. In this work we study the properties of a model in this class where the birth…

统计力学 · 物理学 2009-11-11 Emilio Hernandez-Garcia , Cristobal Lopez

The evolutionary force of recombination is lacking in asexually reproducing populations. As a consequence, the population can suffer an irreversible accumulation of deleterious mutations, a phenomenon known as Muller's ratchet. We formulate…

概率论 · 数学 2007-09-19 A. Etheridge , P. Pfaffelhuber , A. Wakolbinger

Understanding how stochastic and non-linear deterministic processes interact is a major challenge in population dynamics theory. After a short review, we introduce a stochastic individual-centered particle model to describe the evolution in…

概率论 · 数学 2009-06-29 Regis Ferriere , Viet Chi Tran
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