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We introduce a general class of branching Markov processes for the modelling of a parasite infection in a cell population. Each cell contains a quantity of parasites which evolves as a diffusion with positive jumps. The growth rate,…

概率论 · 数学 2020-11-02 Aline Marguet , Charline Smadi

We consider a partial differential equation model for the growth of heterogeneous cell populations subdivided into multiple distinct discrete phenotypes. In this model, cells preferentially move towards regions where they feel less…

偏微分方程分析 · 数学 2025-04-04 José A. Carrillo , Tommaso Lorenzi , Fiona R. Macfarlane

In active matter and living matter, such as clusters of migrating cells, collective dynamics emerges from the underlying interactions. A common assumption of theoretical descriptions of collective cell migration is that these interactions…

It is essential to understand the dynamics of epidemics in the presence of coexisting pathogens. There are various phenomenon that can effect the dynamics. In this paper, we formulate a mathematical model using different assumptions to…

种群与进化 · 定量生物学 2021-11-02 S. Ghersheen , V. Kozlov , U. Wennergren

We employ the framework of multitype Galton-Watson processes to model a population of dividing cells. The cellular type is represented by its biological age, defined as the count of harmful proteins hosted by the cell. The stochastic…

概率论 · 数学 2024-06-03 Serik Sagitov , Lotta Eriksson , Marija Cvijovic

Understanding to what extent stem cell potential is a cell-intrinsic property, or an emergent behavior coming from global tissue dynamics and geometry, is a key outstanding question of systems and stem cell biology. Here, we propose a…

A number of biological processes, such as embryo development, cancer metastasis or wound healing, rely on cells moving in concert. The mechanisms leading to the emergence of coordinated motion remain however largely unexplored. Although…

细胞行为 · 定量生物学 2011-08-23 Alexandre J Kabla

We propose and investigate a one-parameter probabilistic mixture of one-dimensional elementary cellular automata under the guise of a model for the dynamics of a single-species unstructured population with nonoverlapping generations in…

统计力学 · 物理学 2018-03-09 J. Ricardo G. Mendonça

A dynamic model for cell differentiation is studied, where cells with internal chemical reaction dynamics interact with each other and replicate. It leads to spontaneous differentiation of cells and determination, as is discussed in the…

adap-org · 物理学 2007-05-23 Chikara Furusawa , Kunihiko Kaneko

We consider the mean-field approximation of an individual-based model describing cell motility and proliferation, which incorporates the volume exclusion principle, the go-or-grow hypothesis and an explicit cell cycle delay. To utilise the…

细胞行为 · 定量生物学 2019-03-05 Ruth E. Baker , Péter Boldog , Gergely Röst

We live in a time where climate models predict future increases in environmental variability and biological invasions are becoming increasingly frequent. A key to developing effective responses to biological invasions in increasingly…

种群与进化 · 定量生物学 2015-12-16 Sebastian J. Schreiber , Maureen E. Ryan

We describe the evolution of the quantity of parasites in a population of cells which divide in continuous-time. The quantity of parasites in a cell follows a Feller diffusion, which is splitted randomly between the two daughter cells when…

种群与进化 · 定量生物学 2011-01-18 Vincent Bansaye , Viet Chi Tran

The first chapter concerns monotype population models. We first study general birth and death processes and we give non-explosion and extinction criteria, moment computations and a pathwise representation. We then show how different scales…

概率论 · 数学 2017-07-06 Vincent Bansaye , Sylvie Méléard

An organism that is newly introduced into an existing population has a survival probability that is dependent on both the population density of its environment and the competition it experiences with the members of that population.…

种群与进化 · 定量生物学 2024-12-17 Jason M. Gray , Rowan J. Barker-Clarke , Jacob G. Scott , Michael Hinczewski

In multicellular organisms, several cell states coexist. For determining each cell type, cell-cell interactions are often essential, in addition to intracellular gene expression dynamics. Based on dynamical systems theory, we propose a…

细胞行为 · 定量生物学 2007-12-05 Akihiko Nakajima , Kunihiko Kaneko

Population structure induced by both spatial embedding and more general networks of interaction, such as model social networks, have been shown to have a fundamental effect on the dynamics and outcome of evolutionary games. These effects…

种群与进化 · 定量生物学 2009-11-13 Gergely J Szollosi , Imre Derenyi

Development combines three basic processes asymmetric --- cell division, signaling and gene regulation --- in a multitude of ways to create an overwhelming diversity of multicellular life-forms. Here, we attempt to chart this diversity…

分子网络 · 定量生物学 2020-01-01 Somya Mani , Tsvi Tlusty

We formulate a mathematical model of competition for resources between representatives of different age groups. A nonlinear kinetic integral-differential equation of the age aggression describes the process of redistribution of resources.…

种群与进化 · 定量生物学 2013-10-01 P. A. Golovinski

In most biological studies and processes, cell proliferation and population dynamics play an essential role. Due to this ubiquity, a multitude of mathematical models has been developed to describe these processes. While the simplest models…

种群与进化 · 定量生物学 2012-02-23 J. Hasenauer , D. Schittler , F. Allgower

Dense monolayers of living cells display intriguing relaxation dynamics, reminiscent of soft and glassy materials close to the jamming transition, and migrate collectively when space is available, as in wound healing or in cancer invasion.…