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Do biological cells sense time by the number of their divisions, a process that ends at senescence? We consider the question "can the cell's perception of time be expressed through the length of the shortest telomere?" The answer is that…

亚细胞过程 · 定量生物学 2017-11-15 Zeev Schuss , Kimsy Tor , David Holcman

Nearly all cell models explicitly or implicitly deal with the biophysical constraints that must be respected for life to persist. Despite this, there is almost no systematicity in how these constraints are implemented, and we lack a…

细胞行为 · 定量生物学 2026-05-20 Connor McShaffrey , Eran Agmon , Randall D. Beer

We are interested in modeling some two-level population dynamics, resulting from the interplay of ecological interactions and phenotypic variation of individuals (or hosts) and the evolution of cells (or parasites) of two types living in…

概率论 · 数学 2011-01-21 Sylvie Méléard , Sylvie Roelly

Two crucial elements facilitate the understanding and control of communicable disease spread within a social setting. These components are, the underlying contact structure among individuals that determines the pattern of disease…

种群与进化 · 定量生物学 2013-05-29 Pierre-Andre Noel , Bahman Davoudi , Louis J. Dube , Robert C. Brunham , Babak Pourbohloul

Based on symmetry consideration of migration and shape deformations, we formulate phenomenologically the dynamics of cell crawling in two dimensions. Forces are introduced to change the cell shape. The shape deformations induce migration of…

生物物理 · 物理学 2016-03-23 Takao Ohta , Mitsusuke Tarama , Masaki Sano

A nonlinear time-delay model is proposed to describe the interaction dynamics between criminal and non-criminal populations, combining social influence mechanisms, saturation effects represented by a Holling type II functional response, and…

动力系统 · 数学 2026-05-25 Pablo Amster , Andrés Rivera , Sebastián Pedersen

Cell proliferation and cell movement are fundamentally stochastic processes which lead to variability in the growth and spatial structure of cell populations in many biological settings, such as cell invasion, wound healing, and tumour…

细胞行为 · 定量生物学 2026-04-23 John Carlo Dimaculangan , Cameron A. Smith , Christian A. Yates

Intercellular exchange networks are essential for the adaptive capabilities of populations of cells. While diffusional exchanges have traditionally been difficult to map, recent advances in nanotechnology enable precise probing of exchange…

统计力学 · 物理学 2024-12-13 Luís C. F. Latoski , Andrea De Martino , Daniele De Martino

An adult human body is made up of some 30 to 40 trillion cells, all of which stem from a single fertilized egg cell. The process by which the right cells appear to arrive in their right numbers at the right time at the right place --…

亚细胞过程 · 定量生物学 2024-12-20 Sean T. Vittadello , Léo Diaz , Yujing Liu , Adriana Zanca , Michael P. H. Stumpf

We study an infection-age structured epidemic model in which both the infectivity and the rate of loss of immunity depend on the time-since-infection. The model can be equivalently viewed as a nonlinear renewal equation for the incidence of…

动力系统 · 数学 2025-11-13 Francesca Scarabel , Harry Coldwell , Tyler Cassidy

What is aging? Mechanistic answers to this question remain elusive despite decades of research. Here, we propose a mathematical model of cellular aging based on a model gene interaction network. Our network model is made of only non-aging…

分子网络 · 定量生物学 2023-09-12 Hong Qin

We reformulate models in epidemiology and population dynamics in terms of probability distributions. This allows us to construct the Fisher information, which we interpret as the metric of a one-dimensional differentiable manifold. For…

种群与进化 · 定量生物学 2024-02-27 Baptiste Filoche , Stefan Hohenegger , Francesco Sannino

We consider a nonlinear coupled discrete-time model of population dynamics. This model describes the movement of populations within a heterogeneous landscape, where the growth of subpopulations are modelled by (possibly different) bounded…

动力系统 · 数学 2024-05-08 Blake McGrane-Corrigan , Oliver Mason , Rafael de Andrade Moral

Collective cell migration is a key driver of embryonic development, wound healing, and some types of cancer invasion. Here we provide a physical perspective of the mechanisms underlying collective cell migration. We begin with a catalogue…

生物物理 · 物理学 2019-10-08 Ricard Alert , Xavier Trepat

We introduce a nonlinear and nonlocal model that describes the range expansion of a population resulting from growth and competition for space. This type of phenomenon underlies the expansion of colonies of immotile cells which motivated…

偏微分方程分析 · 数学 2026-02-26 Henri Berestycki , Antoine Mellet

The homeostasis of epithelial tissue relies on a balance between the self-renewal of stem cell populations, cellular differentiation, and loss. Although this balance needs to be tightly regulated to avoid pathologies, such as tumor growth,…

生物物理 · 物理学 2024-04-10 Johannes C. Krämer , Edouard Hannezo , Gerhard Gompper , Jens Elgeti

Predicting competitive outcomes typically requires fitting dynamical models to data, from which interaction strengths and coexistence indicators such as invasion criteria can be produced. Methods that allow to propagate parameter…

种群与进化 · 定量生物学 2025-04-10 Matthieu Paquet , Frédéric Barraquand

The mechanics of crawling cells on a substrate is investigated by using a minimal model that satisfies the force-free condition. A cell is described by two subcellular elements connected by a linear actuator that changes the length of the…

软凝聚态物质 · 物理学 2018-04-18 Mitsusuke Tarama , Ryoichi Yamamoto

To understand the mechanisms underlying species coexistence, ecologists often study invasion growth rates of theoretical and data-driven models. These growth rates correspond to average per-capita growth rates of one species with respect to…

种群与进化 · 定量生物学 2022-08-02 Josef Hofbauer , Sebastian J. Schreiber

The complex interplay between population movements in space and non-homogeneous mixing patterns have so far hindered the fundamental understanding of the conditions for spatial invasion through a general theoretical framework. To address…

物理与社会 · 物理学 2014-01-21 Andrea Apolloni , Chiara Poletto , Jose' J. Ramasco , Pablo Jensen , Vittoria Colizza