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Microtubules (MTs) represent basic components of a cytoskeleton. The present work studies nonlinear dynamics of MTs assuming tangential oscillations of the dimers. We introduce a two component model and show that the dynamics of MTs can be…

生物物理 · 物理学 2023-02-06 Slobodan Zdravković , Slobodan Zeković

In the present article we investigate the nonlinear dynamics of microtubules, the basic components of the eukaryotic cytoskeleton, and rely on the known general model. A crucial interaction among constitutive particles is modelled using…

软凝聚态物质 · 物理学 2023-01-23 Slobodan Zdravković , Dragana Ranković

We study the structure and stability of discrete breathers (both pinned and mobile) in two-dimensional nonlinear anisotropic Schrodinger lattices. Starting from a set of identical one-dimensional systems we develop the continuation of the…

斑图形成与孤子 · 物理学 2009-11-11 J. Gomez-Gardenes , L. M. Floria , A. R. Bishop

We present initial results regarding the existence, stability and interaction of linear and nonlinear vibrational modes in a system of two coupled, one dimensional lattices with unequal numbers of masses. The effects on these nonlinear…

生物物理 · 物理学 2007-05-23 Kyle Forinash

A nonlinear wave equation that describes different nonlinear effects in various fields of research was considered. In two particular cases, this equation was reduced to the Sine-Gordon equation and the Born-Infeld equation. Using the slowly…

斑图形成与孤子 · 物理学 2023-07-07 G. T. Adamashvili

In the present paper we deal with nonlinear dynamics of microtubules (MTs). The structure and role of MTs in cells are explained. One model explaining MT dynamics is explained. Solutions of the crucial nonlinear differential equation depend…

生物物理 · 物理学 2025-01-22 Slobodan Zdravković

Microtubules are a major component of the cytoskeleton distinguished by highly dynamic behavior both in vitro and in vivo. We propose a general mathematical model that accounts for the growth, catastrophe, rescue and nucleation processes in…

生物物理 · 物理学 2015-05-13 Peter Hinow , Vahid Rezania , Jack A. Tuszynski

We present a family of discrete breathers, which exists in a nonlinear polarizability model of ferroelectric materials. The core-shell model is set up in its non-dimensionalized Hamiltonian form and its linear spectrum is examined.…

计算物理 · 物理学 2015-06-03 C. Hoogeboom , P. G. Kevrekidis , A. Saxena , A. R. Bishop

A quasi-one-dimensional Bose-Einstein condensate loaded into a quasi-periodic potential created by two sub-lattices of comparable amplitudes and incommensurate periods is considered. Although the conventional tight-binding approximation is…

量子物理 · 物理学 2026-05-22 Vladimir V. Konotop

In the present paper we describe a model of nonlinear dynamics of microtubules (MT) assuming a single longitudinal degree of freedom per tubulin dimer. This is a longitudinal displacement of a dimer at a certain position with respect to the…

生物物理 · 物理学 2015-06-11 Slobodan Zdravković , Miljko V. Satarić , Slobodan Zeković

We study the dynamics of discrete breathers -- spatially localized and time-periodic solutions -- inside the bandgap of a nonlinear honeycomb lattice where the dispersion landscape approaches a so-called semi-Dirac point in which the bands…

斑图形成与孤子 · 物理学 2026-02-10 Andrew Hofstrand

Nonlinear classical Hamiltonian lattices exhibit generic solutions in the form of discrete breathers. These solutions are time-periodic and (typically exponentially) localized in space. The lattices exhibit discrete translational symmetry.…

patt-sol · 物理学 2015-06-26 S. Flach , C. R. Willis

In this paper a quantum mechanical description of the assembly/disassembly process for microtubules is proposed. We introduce creation and annihilation operators that raise or lower the microtubule length by a tubulin layer. Following that,…

细胞行为 · 定量生物学 2007-05-23 Vahid Rezania , Jack Tuszynski

We study a locally resonant granular material in the form of a precompressed Hertzian chain with linear internal resonators. Using an asymptotic reduction, we derive an effective nonlinear Schr\"odinger (NLS) modulation equation. This, in…

斑图形成与孤子 · 物理学 2016-06-29 Lifeng Liu , Guillaume James , Panayotis Kevrekidis , Anna Vainchtein

We consider a previously experimentally realized discrete model that describes a mechanical metamaterial consisting of a chain of pairs of rigid units connected by flexible hinges. Upon analyzing the linear band structure of the model, we…

斑图形成与孤子 · 物理学 2023-02-15 H. Duran , J. Cuevas-Maraver , P. G. Kevrekidis , A. Vainchtein

Solitons and breathers are nonlinear modes that exist in a wide range of physical systems. They are fundamental solutions of a number of nonlinear wave evolution equations, including the uni-directional nonlinear Schr\"odinger equation…

We explore dynamics of discrete breathers and multi-breathers in finite one-dimensional chain. The model involves parabolic on-site potential with rigid constraints and linear nearest-neighbor coupling. The rigid non-ideal impact…

斑图形成与孤子 · 物理学 2016-09-28 Itay Grinberg , Oleg V. Gendelman

Breathing solitons are nonlinear waves in which the energy concentrates in a localized and oscillatory fashion. Similarly to stationary solitons, breathers in dissipative systems can form stable bound states displaying molecule-like…

We investigate the existence of spatially localised solutions, in the form of discrete breathers, in general damped and driven nonlinear lattice systems of coupled oscillators. Conditions for the exponential decay of the difference between…

斑图形成与孤子 · 物理学 2013-10-25 Dirk Hennig

We explore a recently proposed locally resonant granular system bearing harmonic internal resonators in a chain of beads interacting via Hertzian elastic contacts. In this system, we propose the existence of two types of configurations: (a)…

斑图形成与孤子 · 物理学 2015-06-10 Lifeng Liu , Guillaume James , Panayotis Kevrekidis , Anna Vainchtein
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