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相关论文: Multistability of Bi-Reaction Networks

200 篇论文

We solve a conjecture on multiple nondegenerate steady states, and prove bistability for sequestration networks. More specifically, we prove that for any odd number of species, and for any production factor, the fully open extension of a…

动力系统 · 数学 2019-06-04 Xiaoxian Tang , Jie Wang

We present a systematic mathematical analysis of the qualitative steady-state response to rate perturbations in large classes of reaction networks. This includes multimolecular reactions and allows for catalysis, enzymatic reactions,…

动力系统 · 数学 2017-11-22 Bernhard Brehm , Bernold Fiedler

A multistationarity region is the part of a reaction network's parameter space that gives rise to multiple steady states. Mathematically, this region consists of the positive parameters for which a parametrized family of polynomial…

动力系统 · 数学 2024-04-08 Allison McClure , Anne Shiu

Many biochemical and industrial applications involve complicated networks of simultaneously occurring chemical reactions. Under the assumption of mass action kinetics, the dynamics of these chemical reaction networks are governed by systems…

动力系统 · 数学 2014-07-15 Matthew D. Johnston

Motivated by investigating multistationarity in biochemical systems, we address saddle-node bifurcations for chemical reaction networks endowed with general kinetics. At positive equilibria, we identify structural network conditions that…

动力系统 · 数学 2023-07-24 Nicola Vassena

A natural condition on the structure of the underlying chemical reaction network, namely weak reversibility, is shown to guarantee the existence of an equilibrium (steady state) in each positive stoichiometric compatibility class for the…

定量方法 · 定量生物学 2011-11-14 Jian Deng , Christopher Jones , Martin Feinberg , Adrian Nachman

We apply tools from real algebraic geometry to the problem of multistationarity of chemical reaction networks. A particular focus is on the case of reaction networks whose steady states admit a monomial parametrization. For such systems we…

分子网络 · 定量生物学 2019-08-14 Carsten Conradi , Alexandru Iosif , Thomas Kahle

This work addresses multistationarity of fully open reaction networks equipped with mass action kinetics. We improve upon the existing results relating existence of positive feedback loops in a reaction network and multistationarity; and we…

分子网络 · 定量生物学 2025-11-11 Shenghao Yao , AmirHosein Sadeghimanesh , Matthew England

Multistationary chemical reaction networks are of interest to scientists and mathematicians alike. While some criteria for multistationarity exist, obtaining explicit reaction rates and steady states that exhibit multistationarity for a…

动力系统 · 数学 2016-04-22 Bryan Félix , Anne Shiu , Zev Woodstock

Many biological systems, such as metabolic pathways, exhibit bistability behavior: these biological systems exhibit two distinct stable states with switching between the two stable states controlled by certain conditions. Since…

定量方法 · 定量生物学 2013-07-04 Yi Ming Zou

In Systems Biology there is a growing interest in the question, whether or not a given mathematical model can admit more than one steady state. As parameter values are often unknown or subject to a very high uncertainty, one is often…

其他定量生物学 · 定量生物学 2009-09-23 Carsten Conradi

Given a real sparse polynomial system, we present a general framework to find explicit coefficients for which the system has more than one positive solution, based on the recent article by Bihan, Santos and Spaenlehauer. We apply this…

动力系统 · 数学 2018-07-17 Frédéric Bihan , Alicia Dickenstein , Magalí Giaroli

Much attention has been focused in recent years on the following algebraic problem arising from applications: which chemical reaction networks, when taken with mass-action kinetics, admit multiple positive steady states? The interest behind…

动力系统 · 数学 2018-06-06 Anne Shiu , Timo de Wolff

A class of chemical reaction networks is described with the property that each positive equilibrium is locally asymptotically stable relative to its stoichiometry class, an invariant subspace on which it lies. The reaction systems treated…

动力系统 · 数学 2013-04-11 Pete Donnell , Murad Banaji

We describe a large class of chemical reaction networks, those endowed with a subtle structural property called concordance. We show that the class of concordant networks coincides precisely with the class of networks which, when taken with…

分子网络 · 定量生物学 2011-09-15 Guy Shinar , Martin Feinberg

The study of the interplay between the structure and dynamics of complex multilevel systems is a pressing challenge nowadays. In this paper, we use a semi-annealed approximation to study the stability properties of Random Boolean Networks…

物理与社会 · 物理学 2012-10-31 Emanuele Cozzo , Alex Arenas , Yamir Moreno

The parameter region of multistationarity of a reaction network contains all the parameters for which the associated dynamical system exhibits multiple steady states. Describing this region is challenging and remains an active area of…

分子网络 · 定量生物学 2024-10-11 Nidhi Kaihnsa , Máté L. Telek

Chemical reaction networks describe interactions between biochemical species. Once an underlying reaction network is given for a biochemical system, the system dynamics can be modelled with various mathematical frameworks such as continuous…

概率论 · 数学 2023-06-22 German Enciso , Radek Erban , Jinsu Kim

Switch-like responses arising from bistability have been linked to cell signaling processes and memory. Revealing the shape and properties of the set of parameters that lead to bistability is necessary to understand the underlying…

分子网络 · 定量生物学 2023-04-26 Máté L. Telek , Elisenda Feliu

The goal of this paper is to gather and develop some necessary and sufficient criteria for injectivity and multistationarity in vector fields associated with a chemical reaction network under a variety of more or less general assumptions on…

动力系统 · 数学 2016-10-28 Murad Banaji , Casian Pantea