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A fundamental challenge in developing data-driven approaches to ecological systems for tasks such as state estimation and prediction is the paucity of the observational or measurement data. For example, modern machine-learning techniques…

定量方法 · 定量生物学 2024-10-11 Zheng-Meng Zhai , Bryan Glaz , Mulugeta Haile , Ying-Cheng Lai

In the classical Lotka-Volterra population models, the interacting species affect each other's growth rate. We propose an alternative model, in which the species affect each other through the limitation coefficients, rather then through the…

动力系统 · 数学 2020-08-14 Philip Korman

A model for synchronization of globally coupled phase oscillators including ``inertial'' effects is analyzed. In such a model, both oscillator frequencies and phases evolve in time. Stationary solutions include incoherent (unsynchronized)…

凝聚态物理 · 物理学 2009-10-31 J. A. Acebron , L. L. Bonilla , R. Spigler

In this paper, we investigate the dynamics of a discrete-time phytoplankton-zooplankton model where the predator functional response and toxin distribution functions follow both Holling Type II and Holling Type III forms simultaneously. We…

动力系统 · 数学 2025-05-16 Sobirjon Shoyimardonov

We consider epidemic and ecological models to investigate their coupled dynamics. Starting with the classical Susceptible-Infected-Recovered (SIR) model for basic epidemic behavior and the predator-prey (Lotka-Volterra, LV) system for…

We study the stability and synchronization of predator-prey populations subjected to noise. The system is described by patches of local populations coupled by migration and predation over a neighborhood. When a single patch is considered,…

元胞自动机与格子气 · 物理学 2008-03-03 Sabrina B. L. Araujo , M. A. M. de Aguiar

A diffusive Lotka-Volterra competition model is considered for the combined effect of spatial dispersal and spatial variations of resource on the population persistence and exclusion. First it is shown that in a two-species system in which…

偏微分方程分析 · 数学 2020-07-21 Wenjie Ni , Junping Shi , Mingxin Wang

We analyze the collective dynamics of hierarchically structured networks of densely connected spiking neurons. These networks of sub-networks may represent interactions between cell assemblies or different nuclei in the brain. The dynamical…

神经元与认知 · 定量生物学 2018-09-14 Fereshteh Lagzi , Fatihcan M. Atay , Stefan Rotter

In this work, a theorem is first proved which presents a game theoretic formulation of a necessary and sufficient sustainizability over a set condition for a general system described by ordinary differential equations (ODEs). Then, two…

最优化与控制 · 数学 2024-03-18 Ioannis V. Manousiouthakis , Vasilios I. Manousiouthakis

The method of generalized modeling has been applied successfully in many different contexts, particularly in ecology and systems biology. It can be used to analyze the stability and bifurcations of steady-state solutions. Although many…

动力系统 · 数学 2015-03-06 Christian Kuehn , Thilo Gross

We investigate the Volterra ecosystem driven by correlated noises. The competition of the predators induces an increasing in population density of the predators. The competition of the preys, however, leads the predators to decay. The…

种群与进化 · 定量生物学 2007-05-23 Wei-Rong Zhong , Yuan-Zhi Shao , Zhen-Hui He

In the current study, we took into account a model of nonlinear ``predator-prey'' interactions including the ``Allee effect'' on both populations and disease in the predator population. The population as a whole is split into three: the…

种群与进化 · 定量生物学 2024-05-27 Khushbu Singh , K. Kaladhar

The generalized Lotka-Volterra (gLV) equations are a mathematical proxy for ecological dynamics. We focus on a gLV model of the gut microbiome, in which the evolution of the gut microbial state is determined in part by pairwise…

种群与进化 · 定量生物学 2020-05-13 Zipeng Wang , Eric W. Jones , Joshua M. Mueller , Jean M. Carlson

Population dynamics are often affected by sudden environmental perturbations. Parameters of stochastic models are often imprecise due to various uncertainties. In this paper, we formulate a stochastic Lotka Volterra food chain chemostat…

概率论 · 数学 2020-04-21 Fei Sun

We propose a simple adaptive-network model describing recent swarming experiments. Exploiting an analogy with human decision making, we capture the dynamics of the model by a low-dimensional system of equations permitting analytical…

无序系统与神经网络 · 物理学 2011-07-15 Cristián Huepe , Gerd Zschaler , Anne-Ly Do , Thilo Gross

In this study, we apply two pillars of Scientific Machine Learning: Neural Ordinary Differential Equations (Neural ODEs) and Universal Differential Equations (UDEs) to the Lotka Volterra Predator Prey Model, a fundamental ecological model…

机器学习 · 计算机科学 2024-11-12 Ranabir Devgupta , Raj Abhijit Dandekar , Rajat Dandekar , Sreedath Panat

How do interactions between species influence their spatial distribution in an ecosystem? To answer this question, we introduce a spatially-extended ecosystem of Generalized Lotka-Volterra type, where species can diffuse and interactions…

统计力学 · 物理学 2025-01-08 Alessandro Salvatore , Fabián Aguirre-López , Ruben Zakine

The loss of synchronizability at large coupling strength is of major concern especially in the fields of secure communication and complex systems. Because theoretically, the coupling mode that can surely stabilize the chaotic/hyperchaotic…

混沌动力学 · 物理学 2018-01-08 Harpartap Singh

Mathematical models support inference and forecasting in ecology and epidemiology, but results depend on the estimation framework. We compare Bayesian and Frequentist approaches across three biological models using four datasets:…

定量方法 · 定量生物学 2026-03-31 Mohammed A. Y. Mohammed , Hamed Karami , Gerardo Chowell

This paper is concerned with reaction-diffusion systems of two symmetric species in spatial dimension one, having two stable symmetric equilibria connected by a symmetric standing front. The first order variation of the speed of this front…

偏微分方程分析 · 数学 2017-03-08 Emmanuel Risler