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In this work, we revisit the basic reproduction rate $\mathcal{R}_{0}$ definition for analysis of epidemic-non-epidemic phases describing the dynamics of the discrete stochastic version of the epidemic $SIR$ model based on the Master…

生物物理 · 物理学 2007-05-23 O. E. Aiello , M. A. A. da Silva

The correct evaluation of the reproductive number $R$ for COVID-19 -- which characterizes the average number of secondary cases generated by each typical primary case -- is central in the quantification of the potential scope of the…

应用统计 · 统计学 2021-04-15 Claire Donnat , Susan Holmes

A pulse vaccination SIR model with periodic infection rate $\beta (t)$ have been proposed and studied. The basic reproductive number $R_0$ is defined. The dynamical behaviors of the model are analyzed with the help of persistence,…

混沌动力学 · 物理学 2009-05-29 Zhen Jin , Mainul Haque , Quanxing Liu

For nearly a century, the initial reproduction number (R0) has been used as a one number summary to compare outbreaks of infectious disease, yet there is no `standard' estimator for R0. Difficulties in estimating R0 arise both from how a…

种群与进化 · 定量生物学 2020-03-25 Shannon Gallagher , Andersen Chang , William F. Eddy

This paper presents a disease-severity-structured epidemic model with treatment necessary only to severe infective individuals to discuss the effect of the treatment capacity on the disease transmission. It is shown that a backward…

种群与进化 · 定量生物学 2021-10-05 Hiromu Gion , Yasuhisa Saito

Symmetry concepts in parametrized dynamical systems may reduce the number of external parameters by a suitable normalization prescription. If, under the action of a symmetry group G, parameter space A becomes a (locally) trivial principal…

种群与进化 · 定量生物学 2023-05-30 Florian Nill

In this paper we first introduce the general stochastic epidemic model for the spread of infectious diseases. Then we give methods for inferring model parameters such as the basic reproduction number $R_0$ and vaccination coverage $v_c$…

统计方法学 · 统计学 2014-11-14 Tom Britton , Federica Giardina

We consider a stochastic model of infection spread on the complete graph on $N$ vertices incorporating dynamic partnerships, which we assume to be monogamous. This can be seen as a variation on the contact process in which some form of edge…

概率论 · 数学 2016-06-23 Eric Foxall , Roderick Edwards , P. van den Driessche

We consider the problem of optimal allocation strategies for a (perfect) vaccine in an infinite-metapopulation model (including SIS, SIR, SEIR,. . .), when the loss function is given by the effective reproduction number Re, which is defined…

最优化与控制 · 数学 2021-10-26 Jean-François Delmas , Dylan Dronnier , Pierre-André Zitt

Recent evidences show that individuals who recovered from COVID-19 can be reinfected. However, this phenomenon has rarely been studied using mathematical models. In this paper, we propose a SEIRE epidemic model to describe the spread of the…

种群与进化 · 定量生物学 2022-05-17 Shaoli Wang , Tengfei Wang , Ya-nen Qi , Fei Xu

During an epidemic outbreak, decision makers crucially need accurate and robust tools to monitor the pathogen propagation. The effective reproduction number, defined as the expected number of secondary infections stemming from one…

信号处理 · 电气工程与系统科学 2026-01-14 Etienne Lasalle , Barbara Pascal

We propose a mathematical framework, based on conic geometric programming, to control a susceptible-infected-susceptible viral spreading process taking place in a directed contact network with unknown contact rates. We assume that we have…

最优化与控制 · 数学 2014-12-09 Shuo Han , Victor M. Preciado , Cameron Nowzari , George J. Pappas

The main aim of the work is to present a general class of two time scales discrete-time epidemic models. In the proposed framework the disease dynamics is considered to act on a slower time scale than a second different process that could…

动力系统 · 数学 2024-02-07 Luis Sanz-Lorenzo , Rafael Bravo de la Parra

We discuss how the presence of a large set of asymptomatic infectives changes our estimate of the COVID-19 basic reproduction number, also known as $R_0$.

种群与进化 · 定量生物学 2020-04-14 Giuseppe Gaeta

In this article, we consider an HIV/AIDS epidemic model with four classes of individuals. We have discussed about basic properties of the system and found the basic reproduction number $R_0$ of the system. The stability analysis of the…

动力系统 · 数学 2023-04-18 Nouar Chorfi , Salem Abdelmalek , Samir Bendoukha

We apply optimal control theory to a tuberculosis model given by a system of ordinary differential equations. Optimal control strategies are proposed to minimize the cost of interventions, considering reinfection and post-exposure…

最优化与控制 · 数学 2013-07-15 Cristiana J. Silva , Delfim F. M. Torres

The time-varying reproduction number $R(t)$ measures the number of new infections per infectious individual and is closely correlated with the time series of infection incidence by definition. The timings of actual infections are rarely…

种群与进化 · 定量生物学 2023-07-10 Oliver Eales , Steven Riley

The reproduction number of deterministic models is an essential quantity to predict whether an epidemic will spread or die out. Thresholds for disease extinction contribute crucial knowledge on disease control, elimination, and mitigation…

种群与进化 · 定量生物学 2013-08-08 Ling Xue , Caterina Scoglio

We initiate a formal study of reproducibility in optimization. We define a quantitative measure of reproducibility of optimization procedures in the face of noisy or error-prone operations such as inexact or stochastic gradient computations…

最优化与控制 · 数学 2022-12-06 Kwangjun Ahn , Prateek Jain , Ziwei Ji , Satyen Kale , Praneeth Netrapalli , Gil I. Shamir

Daily pandemic surveillance, often achieved through the estimation of the reproduction number, constitutes a critical challenge for national health authorities to design countermeasures. In an earlier work, we proposed to formulate the…

信号处理 · 电气工程与系统科学 2022-06-29 Barbara Pascal , Patrice Abry , Nelly Pustelnik , Stéphane G. Roux , Rémi Gribonval , Patrick Flandrin