中文
相关论文

相关论文: Multistability of Reaction Networks with One-Dimen…

200 篇论文

We study the response properties of d-dimensional hypercubic excitable networks to a stochastic stimulus. Each site, modelled either by a three-state stochastic susceptible-infected-recovered-susceptible system or by the probabilistic…

神经元与认知 · 定量生物学 2008-02-13 Vladimir R. V. Assis , Mauro Copelli

Stochastic reaction networks is a powerful class of models for the representation a wide variety of population models including biochemistry. The control of such networks has been recently considered due to their important implications for…

最优化与控制 · 数学 2024-09-23 Corentin Briat , Mustafa Khammash

Power law systems have been studied extensively due to their wide-ranging applications, particularly in chemistry. In this work, we focus on power law systems that can be decomposed into stoichiometrically independent subsystems. We show…

动力系统 · 数学 2024-04-23 Al Jay Lan J. Alamin , Bryan S. Hernandez

In this paper I show that, for a class of reaction networks, the discrete stochastic nature of the reacting species and reactions results in qualitative and quantitative differences between the mean of exact stochastic simulations and the…

其他定量生物学 · 定量生物学 2008-01-03 Chetan J Gadgil

We consider linear elimination of variables in steady state equations of a chemical reaction network. Particular subsets of variables corresponding to sets of so-called reactant-noninteracting species, are introduced. The steady state…

分子网络 · 定量生物学 2018-07-03 Meritxell Sáez , Carsten Wiuf , Elisenda Feliu

We prove that the steady state of a class of multidimensional reaction-diffusion systems is asymptotically stable at the intersection of unweighted space and exponentially weighted Sobolev spaces, and pay particular attention to a special…

偏微分方程分析 · 数学 2022-05-06 Qingxia Li , Xinyao Yang

Within a fully microscopic setting, we derive a variational principle for the non-equilibrium steady states of chemical reaction networks, valid for time-scales over which chemical potentials can be taken to be slowly varying: at…

分子网络 · 定量生物学 2015-06-05 Andrea De Martino , Daniele De Martino , Roberto Mulet , Guido Uguzzoni

We develop a general classification of the nature of the instabilities yielding spatial organization in open nonideal reaction-diffusion systems, based on linear stability analysis. This encompasses dynamics where chemical species diffuse,…

统计力学 · 物理学 2023-10-05 Timur Aslyamov , Francesco Avanzini , Étienne Fodor , Massimiliano Esposito

We study stationary distributions in the context of stochastic reaction networks. In particular, we are interested in complex balanced reaction networks and reduction of such networks by assuming a set of species (called non-interacting…

概率论 · 数学 2024-02-06 Linard Hoessly , Carsten Wiuf , Panqiu Xia

We show that weakly reversible mass-action systems can have a continuum of positive steady states, coming from the zeroes of a multivariate polynomial. Moreover, the same is true of systems whose underlying reaction network is reversible…

分子网络 · 定量生物学 2022-09-14 Balázs Boros , Gheorghe Craciun , Polly Y. Yu

We consider the stability problem for a unitary N+1 fermionic model, i.e., a system of $N$ identical fermions interacting via zero-range interactions with a different particle, in the case of infinite two-body scattering length. We present…

量子气体 · 物理学 2015-09-08 Michele Correggi , Domenico Finco , Alessandro Teta

It is known that, in an $(m \otimes n)$-dimensional quantum system, the maximum dimension of a subspace that contains only entangled states is (m-1)(n-1). We show that the exact same bound is tight if we require the stronger condition that…

量子物理 · 物理学 2013-07-01 Nathaniel Johnston

It has recently been shown that structural conditions on the reaction network, rather than a 'fine-tuning' of system parameters, often suffice to impart 'absolute concentration robustness' on a wide class of biologically relevant,…

概率论 · 数学 2014-01-20 David F. Anderson , German Enciso , Matthew Johnston

This paper develops the concept of decomposition for chemical reaction networks, based on which a network decomposition technique is proposed to capture the stability of large-scale networks characterized by a high number of species, high…

动力系统 · 数学 2021-02-23 Yafei Lu , Chuanhou Gao , Denis Dochain

We study an extended system that without noise shows a spatially homogeneous state, but when submitted to an adequate multiplicative noise, some "noise-induced patterns" arise. The stochastic resonance between these structures is…

斑图形成与孤子 · 物理学 2013-05-29 B. von Haeften , G. Izús , S. Mangioni , A. D. Sánchez , H. S. Wio

We study complex networks of stochastic two-state units. Our aim is to model discrete stochastic excitable dynamics with a rest and an excited state. Both states are assumed to possess different waiting time distributions. The rest state is…

物理与社会 · 物理学 2016-12-02 Simon Christ , Bernard Sonnenschein , Lutz Schimansky-Geier

In this paper, the Turing instability in reaction-diffusion models defined on complex networks is studied. Here, we focus on three types of models which generate complex networks, i.e. the Erd\H{o}s-R\'enyi, the Watts-Strogatz, and the…

斑图形成与孤子 · 物理学 2016-04-22 Yusuke Ide , Hirofumi Izuhara , Takuya Machida

It is known that exact traveling wave solutions exist for families of (n+1)-states stochastic one-dimensional non-equilibrium lattice models with open boundaries provided that some constraints on the reaction rates are fulfilled. These…

统计力学 · 物理学 2009-11-13 F H Jafarpour , S R Masharian

We study the stationary states of networks consisting of weakly coupled bistable units. We prove the existence of a high multiplicity of stable steady states in networks with very general inter-unit dynamics. We present a method for…

patt-sol · 物理学 2008-02-03 R S MacKay , J A Sepulchre

The behavior of some stochastic chemical reaction networks is largely unaffected by slight inaccuracies in reaction rates. We formalize the robustness of state probabilities to reaction rate deviations, and describe a formal connection…

计算复杂性 · 计算机科学 2009-01-28 David Soloveichik