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Physarum Polycephalum is a slime mold that can solve shortest path problems. A mathematical model based on Physarum's behavior, known as the Physarum Directed Dynamics, can solve positive linear programs. In this paper, we present a family…

数据结构与算法 · 计算机科学 2022-07-19 Yuan Gao , Hamidreza Kamkari , Andreas Karrenbauer , Kurt Mehlhorn , Mohammadamin Sharifi

We consider a system of nonlinear ordinary differential equations for the solution of linear programming (LP) problems that was first proposed in the mathematical biology literature as a model for the foraging behavior of acellular slime…

最优化与控制 · 数学 2021-03-30 Vincenzo Bonifaci

We present two results on slime mold computations. In wet-lab experiments (Nature'00) by Nakagaki et al. the slime mold Physarum polycephalum demonstrated its ability to solve shortest path problems. Biologists proposed a mathematical…

数据结构与算法 · 计算机科学 2019-07-01 Ruben Becker , Vincenzo Bonifaci , Andreas Karrenbauer , Pavel Kolev , Kurt Mehlhorn

Physarum Polycephalum is a slime mold that is apparently able to solve shortest path problems. A mathematical model has been proposed by biologists to describe the feedback mechanism used by the slime mold to adapt its tubular channels…

数据结构与算法 · 计算机科学 2019-07-01 Vincenzo Bonifaci , Kurt Mehlhorn , Girish Varma

Consider a learning algorithm, which involves an internal call to an optimization routine such as a generalized eigenvalue problem, a cone programming problem or even sorting. Integrating such a method as a layer(s) within a trainable deep…

机器学习 · 计算机科学 2021-05-11 Zihang Meng , Sathya N. Ravi , Vikas Singh

In the realm of biological flow networks, the ability to dynamically adjust to varying demands is paramount. Drawing inspiration from the remarkable adaptability of Physarum polycephalum, we present a novel physical mechanism tailored to…

软凝聚态物质 · 物理学 2023-10-05 Vidyesh Rao Anisetti , Ananth Kandala , J. M. Schwarz

A supply chain is a system which moves products from a supplier to customers. The supply chains are ubiquitous. They play a key role in all economic activities. Inspired by biological principles of nutrients' distribution in protoplasmic…

神经与进化计算 · 计算机科学 2014-03-24 Xiaoge Zhang , Andrew Adamatzky , Xin-She Yang , Hai Yang , Sankaran Mahadevan , Yong Deng

In this paper we present a connection between two dynamical systems arising in entirely different contexts: one in signal processing and the other in biology. The first is the famous Iteratively Reweighted Least Squares (IRLS) algorithm…

数据结构与算法 · 计算机科学 2016-01-13 Damian Straszak , Nisheeth K. Vishnoi

Optimization of fluid transport in the slime mold Physarum polycephalum has been the subject of several modeling efforts in recent literature. Existing models assume that the tube adaptation mechanism in P. polycephalum's tubular network is…

组织与器官 · 定量生物学 2019-07-01 Vincenzo Bonifaci

The slime mould Physarum polycephalum displays adaptive transport dynamics and network formation that have inspired its use as a model of biological computation. We develop a Lagrangian formulation of Physarum's adaptive dynamics on…

神经元与认知 · 定量生物学 2025-11-12 Ricard Solé , Jordi Pla-Mauri

In this work we study and expand a model describing the dynamics of a unicellular slime mold, Physarum Polycephalum (PP), which was proposed to simulate the ability of PP to find the shortest path connecting two food sources in a maze. The…

数值分析 · 数学 2020-09-29 Enrico Facca , Franco Cardin , Mario Putti

The true slime mould Physarum polycephalum is a recent well studied example of how complex transport networks emerge from simple auto-catalytic and self- organising local interactions, adapting structure and function against changing…

新兴技术 · 计算机科学 2015-03-29 Jeff Jones

Slime mould Physarum polycephalum is large single cell with intriguingly smart behaviour. The slime mould shows outstanding abilities to adapt its protoplasmic network to varying environmental conditions. The slime mould can solve tasks of…

新兴技术 · 计算机科学 2013-04-09 Andrew Adamatzky , Rachel Armstrong , Jeff Jones , Yukio-Pegio Gunji

True slime mould Physarum polycephalum approximates a range of complex computations via growth and adaptation of its proto- plasmic transport network, stimulating a large body of recent research into how such a simple organism can perform…

新兴技术 · 计算机科学 2015-03-12 Jeff Jones , Andrew Adamatzky

Decision-making is the process of selecting an action among alternatives, allowing biological and artificial systems to navigate complex environments and optimize behavior. While neural systems rely on neuron-based sensory processing and…

Physarum Polycephalum is a unicellular slime mold that has been intensely studied due to its ability to solve mazes, find shortest paths, generate Steiner trees, share knowledge, remember past events, and its applications to unconventional…

生物物理 · 物理学 2022-10-18 Sheryl Hsu , Laura P. Schaposnik

The giant single-celled slime mould Physarum polycephalum has inspired rapid develop- ments in unconventional computing substrates since the start of this century. This is primarily due to its simple component parts and the distributed…

新兴技术 · 计算机科学 2015-11-19 Jeff Jones

Physarum polycephalum is an acellular slime mould that grows as a highly adaptive network of veins filled with protoplasm. As it forages, Physarum dynamically rearranges its network structure as a response to local stimuli information,…

流体动力学 · 物理学 2023-05-23 Rodrigo Almeida , Rui Dilão

The model organism Physarum polycephalum is known to perform decentralised problem solving despite absence of nervous system. Experimental evidence and modelling studies have linked these abilities, and in particular maze-solving, to some…

生物物理 · 物理学 2026-02-19 Daniele Proverbio , Giulia Giordano

Computing a polygon defining a set of planar points is a classical problem of modern computational geometry. In laboratory experiments we demonstrate that a concave hull, a connected alpha-shape without holes, of a finite planar set is…

新兴技术 · 计算机科学 2012-06-26 Andrew Adamatzky
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