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We present properties of Lotka-Volterra equations describing ecological competition among a large number of competing species. First we extend to the case of a non-homogeneous niche space stability conditions for solutions representing…

种群与进化 · 定量生物学 2009-07-22 Emilio Hernandez-Garcia , Cristobal Lopez , Simone Pigolotti , Ken H. Andersen

We consider a sequential cascade of molecular first-reaction events towards a terminal reaction centre in which each reaction step is controlled by diffusive motion of the particles. The model studied here represents a typical reaction…

生物物理 · 物理学 2021-10-13 Denis S. Grebenkov , Ralf Metzler , Gleb Oshanin

The maximum entropy production (MEP) principle is a hypothetical law of physics which dictates that complex systems, far from equilibrium, evolve into an ordered dissipative structure (DS) which generates as much entropy per second as…

统计力学 · 物理学 2026-05-28 Albert Han , Jiri Kataman-Kustwan , Alexey Bezryadin

Translation of mRNA into protein is a fundamental yet complex biological process with multiple factors that can potentially affect its efficiency. Here, we study a stochastic model describing the traffic flow of ribosomes along the mRNA…

数学物理 · 物理学 2020-01-23 Dan D. Erdmann-Pham , Khanh Dao Duc , Yun S. Song

The interior of a living cell is an active, fluctuating, and crowded environment. Yet, it maintains a high level of coherent organization, which is readily apparent in the intracellular transport network. Membrane-bound compartments called…

Natural selection drives species to develop brains, with sizes that increase with the complexity of the tasks to be tackled. Our goal is to investigate the balance between the metabolic costs of larger brains compared to the advantage they…

人工智能 · 计算机科学 2021-01-28 Oren Neumann , Claudius Gros

This chapter introduces resource augmentation, in which the performance of an algorithm is compared to the best-possible solution that is handicapped by less resources. We consider three case studies: online paging, with cache size as the…

数据结构与算法 · 计算机科学 2020-07-28 Tim Roughgarden

We present a simple model of adaptive radiations in evolution based on species competition. Competition is found to promote species divergence and branching, and to dampen the net species production. In the model simulations, high taxonomic…

种群与进化 · 定量生物学 2007-05-23 Birgitte Freiesleben De Blasio , Fabio Vittorio De Blasio

We show that iterative coding systems can not surpass capacity using only quantities which naturally appear in density evolution. Although the result in itself is trivial, the method which we apply shows that in order to achieve capacity…

信息论 · 计算机科学 2007-07-13 Cyril Measson , Andrea Montanari , Rudiger Urbanke

We study online weighted bipartite matching of reusable resources where an adversarial sequence of requests for resources arrive over time. A resource that is matched is 'used' for a random duration, drawn independently from a…

数据结构与算法 · 计算机科学 2023-04-10 Jackie Baek , Shixin Wang

We consider processes that coincide with a given diffusion process except on the boundaries of a finite collection of domains. The behavior on each of the boundaries is asymmetric: the process is much more likely to enter the interior of…

概率论 · 数学 2020-03-18 Mark Freidlin , Leonid Koralov

We propose a type-dependent branching model with mutation and competition for modeling phylogenies of a virus population. The competition kernel depends for any two virus particles on the particles' types, the total mass of the population…

概率论 · 数学 2017-05-10 Sandra Kliem , Anita Winter

I introduce an axiomatic representation, called ecoset, to consider interactions between species in ecological systems. For interspecific competition, the exclusion conjecture (Gause) is put in a symbolic way and used as a basic operational…

种群与进化 · 定量生物学 2007-05-23 J. C. Flores

We give an new proof of the well-known competitive exclusion principle in the chemostat model with $n$ species competing for a single resource, for any set of increasing growth functions. The proof is constructed by induction on the number…

经典分析与常微分方程 · 数学 2017-12-01 Alain Rapaport , Mario Veruete

We consider a continuum mechanical model for the migration of multiple cell populations through parts of tissue separated by thin membranes. In this model, cells belonging to different populations may be characterised by different…

偏微分方程分析 · 数学 2021-09-28 Chiara Giverso , Tommaso Lorenzi , Luigi Preziosi

Solutes added to solutions often dramatically impact molecular processes ranging from the suspension or precipitation of colloids to biomolecular associations and protein folding. Here we revisit the origins of the effective attractive…

软凝聚态物质 · 物理学 2013-11-15 Shahar Sukenik , Liel Sapir , Daniel Harries

We study the stochastic evolution of four species in cyclic competition in a well mixed environment. In systems composed of a finite number $N$ of particles these simple interaction rules result in a rich variety of extinction scenarios,…

统计力学 · 物理学 2012-07-09 C. H. Durney , S. O. Case , M. Pleimling , R. K. P. Zia

We study combinatorial structures arising from finite-time transition probabilities of the Totally Asymmetric Simple Exclusion Process with open boundary conditions. While much of the existing combinatorial theory regarding the TASEP…

统计力学 · 物理学 2026-05-29 Lorenzo Vito Dal Zovo

We consider the influence of disorder on the non-equilibrium steady state of a minimal model for intracellular transport. In this model particles move unidirectionally according to the \emph{totally asymmetric exclusion process} (TASEP) and…

统计力学 · 物理学 2007-05-23 P. Pierobon , M. Mobilia , R. Kouyos , E. Frey

We study the competition for space between two cell lines that differ only in the expression of the Ras oncogene. The two cell populations are initially separated and set to migrate antagonistically towards an in-between stripe of free…