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This paper deepens into the analysis of the protein secondary structure using Frenet frame to describe the curvature and torsion of the discrete curve formed by the protein $\alpha$-carbons. We show how a simple criterion based on the…

生物物理 · 物理学 2025-12-08 M. Prados , M. D. Hernández de la Torre , F. de Soto

This paper introduces the concept of Fractal Frenet equations, a set of differential equations used to describe the behavior of vectors along fractal curves. The study explores the analogue of arc length for fractal curves, providing a…

Protein molecules can be approximated by discrete polygonal chains of amino acids. Standard topological tools can be applied to the smoothening of the polygons to introduce a topological classification of proteins, for example, using the…

生物大分子 · 定量生物学 2019-03-12 Dmitry Melnikov , Antti J Niemi , Ara Sedrakyan

Utilizing recently developed abstract notions of sectional curvature, we introduce a method for constructing a curvature-based geometric profile of discrete metric spaces. The curvature concept that we use here captures the metric relations…

计算机视觉与模式识别 · 计算机科学 2025-09-18 Charlotte Beylier , Parvaneh Joharinad , Jürgen Jost , Nahid Torbati

Using the moving frame and invariants, any discrete curve in $\R^3$ could be uniquely identified by its centroaffine curvatures and torsions. In this paper, depending on the affine curvatures of the fractal curves, such as Koch curve and…

微分几何 · 数学 2016-12-19 Yun Yang , Yanhua Yu

Motivated by the existence problem of Fourier frames on fractal measures, we introduce Bessel and frame measures for a given finite measure on $\br^d$, as extensions of the notions of Bessel and frame spectra that correspond to bases of…

泛函分析 · 数学 2012-04-03 Dorin Ervin Dutkay , Deguang Han , Eric Weber

We propose a notion of discrete elastic and area-constrained elastic curves in 2-dimensional space forms. Our definition extends the well-known discrete Euclidean curvature equation to space forms and reflects various geometric properties…

微分几何 · 数学 2025-01-24 Tim Hoffmann , Jannik Steinmeier , Gudrun Szewieczek

The paper is devoted to differential geometric invariants determining a Frenet curve in up to a direct similarity These invariants can be presented by the Euclidean curvatures in terms of an arc lengths of the spherical indicatrices. Then,…

微分几何 · 数学 2017-11-30 Fatma Gökçelik , Seher Kaya , Yusuf Yayli , F. Nejat Ekmekci

In this letter, the possible dynamic scaling properties of protein molecules in folding are investigated theoretically by assuming that the protein molecules are percolated networks. It is shown that the fractal character and the fractal…

凝聚态物理 · 物理学 2007-05-23 Liang-Jian Zou , X. G. Gong , Zheng-Gang Zhu

This paper proposes a new mathematical framework that can be applied to biological problems such as analysis of the structures of proteins and protein complexes. In particular, it gives a new method for encoding the three-dimensional…

组合数学 · 数学 2007-05-23 Naoto Morikawa

In nature the three-dimensional structure of a protein is encoded in the corresponding gene. In this paper we describe a new method for encoding the three-dimensional structure of a protein into a binary sequence. The feature of the method…

组合数学 · 数学 2007-05-23 Naoto Morikawa

The analysis of curves has been routinely dealt with using tools from functional data analysis. However its extension to multi-dimensional curves poses a new challenge due to its inherent geometric features that are difficult to capture…

统计方法学 · 统计学 2022-03-07 Juhyun Park , Nicolas Brunel , Perrine Chassat

Accurately segmenting 3D curvilinear structures in medical imaging remains challenging due to their complex geometry and the scarcity of diverse, large-scale datasets for algorithm development and evaluation. In this paper, we use dendritic…

This thesis is devoted to the Differential Geometry of curves and surfaces along with applications in Quantum Mechanics. In the 1st part we introduce the well known Frenet frame. Later, we show that the curvature function is a lower bound…

微分几何 · 数学 2018-06-26 Luiz C. B. da Silva

The {\em focal curve} of an immersed smooth curve $\gamma:s\mapsto \gamma(s)$, in Euclidean space $\R^{m+1}$, consists of the centres of its osculating hyperspheres. The focal curve may be parametrised in terms of the Frenet frame of…

微分几何 · 数学 2019-11-05 Ricardo Uribe-Vargas

Any two equivalent discrete curves must have the same invariants at the corresponding points under an affine transformation. In this paper, we construct the moving frame and invariants for the discrete centroaffine curves, which could be…

微分几何 · 数学 2016-12-04 Yun Yang

Finite frames, or spanning sets for finite-dimensional Hilbert spaces, are a ubiquitous tool in signal processing. There has been much recent work on understanding the global structure of collections of finite frames with prescribed…

泛函分析 · 数学 2023-09-14 Tom Needham , Clayton Shonkwiler

In this paper we derive a variational formulation for a linear curved beam which is natively expressed in global Cartesian coordinates. During derivation the beam midline is assumed to be implicitly described by a vector distance function…

数值分析 · 数学 2014-04-09 Peter Hansbo , Mats G. Larson , Karl Larsson

Geometric frameworks for analyzing curves are common in applications as they focus on invariant features and provide visually satisfying solutions to standard problems such as computing invariant distances, averaging curves, or registering…

统计方法学 · 统计学 2025-11-24 Perrine Chassat , Juhyun Park , Nicolas Brunel

Discrete trigonometric transformations, such as the discrete Fourier and cosine/sine transforms, are important in a variety of applications due to their useful properties. For example, one well-known property is the convolution theorem for…

信息论 · 计算机科学 2015-10-05 Xing Ouyang , Cleitus Antony , Fatima Gunning , Hongyu Zhang , Yong Liang Guan
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