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The recently developed energy conserving semi-implicit method (ECsim) for PIC simulation is applied to multiple scale problems where the electron-scale physics needs to be only partially retained and the interest is on the macroscopic or…

计算物理 · 物理学 2017-05-24 Giovanni Lapenta , Diego Gonzalez-Herrero , Elisabetta Boella

A two-temperature magnetohydrodynamic (MHD) model, which evolves the electron and ion temperatures separately, is implemented in the PSI-Tet code and used to model plasma dynamics in the HIT-SI experiment. When compared with…

等离子体物理 · 物理学 2020-07-16 Alan A. Kaptanoglu , Thomas E. Benedett , Kyle D. Morgan , Chris J. Hansen , Thomas R. Jarboe

In real-world problems, environmental noise is often idealized as Gaussian white noise, despite potential temporal dependencies. The Linear Inverse Model (LIM) is a class of data-driven methods that extract dynamic and stochastic…

数值分析 · 数学 2025-05-01 Justin Lien , Yan-Ning Kuo , Hiroyasu Ando , Shoichiro Kido

Efficient Boltzmann-sampling using first-principles methods is challenging for extended systems due to the steep scaling of electronic structure methods with the system size. Stochastic approaches provide a gentler system-size dependency at…

计算物理 · 物理学 2020-05-20 Eitam Arnon , Eran Rabani , Daniel Neuhauser , Roi Baer

We present the complete set of stochastic Verlet-type algorithms that can provide correct statistical measures for both configurational and kinetic sampling in discrete-time Langevin systems. The approach is a brute-force general…

统计力学 · 物理学 2020-10-06 Niels Grønbech-Jensen

Physics-informed neural networks (PINN) is a machine learning (ML)-based method to solve partial differential equations that has gained great popularity due to the fast development of ML libraries in the last few years. The…

化学物理 · 物理学 2024-12-31 Martin A. Achondo , Jehanzeb H. Chaudhry , Christopher D. Cooper

We provide an analytical framework for analyzing the quality of stochastic Verlet-type integrators for simulating the Langevin equation. Focusing only on basic objective measures, we consider the ability of an integrator to correctly…

计算物理 · 物理学 2026-02-12 Niels Grønbech-Jensen

A multilevel approach to sample the potential energy surface in a path integral formalism is proposed. The purpose is to reduce the required number of ab initio evaluations of energy and forces in ab initio path integral molecular dynamics…

计算物理 · 物理学 2014-12-22 Hua Y. Geng

The $\delta f$ particle-in-cell algorithm has been a useful tool in studying the physics of plasmas, particularly turbulent magnetized plasmas in the context of gyrokinetics. The reduction in noise due to not having to resolve the full…

等离子体物理 · 物理学 2016-05-25 George J. Wilkie , William Dorland

When simulating molecular systems using deterministic equations of motion (e.g., Newtonian dynamics), such equations are generally numerically integrated according to a well-developed set of algorithms that share commonly agreed-upon…

计算物理 · 物理学 2014-08-08 David A. Sivak , John D. Chodera , Gavin E. Crooks

Imaginary-time path integral (PI) is a rigorous tool to treat nuclear quantum effects in static properties. However, with its high computational demand, it is crucial to devise precise estimators. We introduce generalized PI estimators for…

统计力学 · 物理学 2024-08-22 Sabry G. Moustafa , Andrew J. Schultz

Many physical systems are described by partial differential equations (PDEs), and solving these equations and estimating their coefficients or boundary conditions (BCs) from observational data play a crucial role in understanding the…

机器学习 · 计算机科学 2025-07-18 Tomohisa Okazaki

Path integrals have, over the years, proven to be an extremely versatile tool for simulating the dynamics of open quantum systems. The initial limitations of applicability of these methods in terms of the size of the system has steadily…

量子物理 · 物理学 2024-06-25 Amartya Bose

We present a numerical path-integral iteration scheme for the low dimensional reduced density matrix of a time-dependent quantum dissipative system. Our approach simultaneously accounts for the combined action of a microscopically modelled…

量子物理 · 物理学 2016-10-12 A. M. Barth , A. Vagov , V. M. Axt

We present a new efficient hybrid parameter estimation method based on the idea, that if nonlinear dynamic models are stated in terms of a system of equations that is linear in terms of the parameters, then regularized ordinary least…

This thesis focuses on the discovery of stochastic differential equations (SDEs) and stochastic partial differential equations (SPDEs) from noisy and discrete time series. A major challenge is selecting the simplest possible correct model…

机器学习 · 统计学 2025-07-08 Andonis Gerardos

We introduce a computational framework for generating realistic transition paths between distinct conformations of large bio-molecular systems. The method is built on a stochastic integro-differential formulation derived from the Langevin…

生物大分子 · 定量生物学 2025-12-02 Patrice Koehl , Marc Delarue , Henri Orland

We consider simple stochastic climate models, described by slowly time-dependent Langevin equations. We show that when the noise intensity is not too large, these systems can spend substantial amounts of time in metastable equilibrium,…

大气与海洋物理 · 物理学 2007-05-23 Nils Berglund , Barbara Gentz

For a gas-solid interfacial system where chemical species undergo reversible adsorption, we develop a mesoscopic stochastic modeling method that simulates both gas-phase hydrodynamics and surface coverage dynamics by coupling the Langmuir…

This study employed an artificial intelligence-enhanced molecular simulation framework to enable efficient Path Integral Molecular Dynamics (PIMD) simulations. Owing to its modular architecture and high-throughput capabilities, the…

化学物理 · 物理学 2025-04-01 Cheng Fan , Maodong Li , Sihao Yuan , Zhaoxin Xie , Dechin Chen , Yi Isaac Yang , Yi Qin Gao