相关论文: Under-knotted and over-knotted polymers: compact s…

Emerging experimental platforms use amorphousness, a constrained form of disorder, to tailor meta-material properties. We study localization under this type of disorder in a family of 2D models generalizing recent experiments on photonic…

We discuss an "extrinsic" property of knots in a 3-subspace of the 3-sphere $S^3$ to characterize how the subspace is embedded in $S^3$. Specifically, we show that every knot in a subspace of the 3-sphere is transient if and only if the…

We consider the problem of finding and enumerating polyominos that can be folded into multiple non-isomorphic boxes. While several computational approaches have been proposed, including SAT, randomized algorithms, and decision diagrams,…

Finite-order invariants of knots in arbitrary 3-manifolds (including non-orientable ones) are constructed and studied by methods of the topology of discriminant sets. Obstructions to the integrability of admissible weight systems to…

Using Monte Carlo simulations and advanced knot localization methods, we analyze the length and distribution of prime components in composite knots tied on Freely Jointed Rings (FJRs). For increasing contour length, we observe the…

Kinetic magnetism is an iconic and rare example of collective quantum order that emerges from the interference of paths taken by a hole in a sea of strongly interacting fermions. Here the lattice topology plays a fundamental role, with odd…

Loop formation between monomers in the interior of semiflexible chains describes elementary events in biomolecular folding and DNA bending. We calculate analytically the interior distance distribution function for semiflexible chains using…

We generate compact localized states in an electrical diamond lattice, comprised of only capacitors and inductors, via local driving near its flatband frequency. We compare experimental results to numerical simulations and find very good…

Given a (genus 2) cube-with-holes M, i.e. the complement in S^3 of a handlebody H, we relate intrinsic properties of M (like its cut number) with extrinsic features depending on the way the handlebody H is knotted in S^3. Starting from a…

We explore a web of connections between quantum entanglement and knot theory by examining how topological entanglement entropy probes the braiding data of quasi-particles in Chern-Simons theory, mainly using $SU(2)$ gauge group as our…

We analyze the motion of individual beads of a polymer chain using a discrete version of De Gennes' reptation model that describes the motion of a polymer through an ordered lattice of obstacles. The motion within the tube can be evaluated…

We investigate the recently reported analogies between pinned vortices in nano-structured superconductors or colloids in optical traps, and spin ice materials. The frustration of colloids and vortices differs essentially from spin ice.…

Numerical studies of the average size of trivially knotted polymer loops with no excluded volume are undertaken. Topology is identified by Alexander and Vassiliev degree 2 invariants. Probability of a trivial knot, average gyration radius,…

We develop off-lattice simulations of semiflexible polymer chains subjected to applied mechanical forces using Markov Chain Monte Carlo. Our approach models the polymer as a chain of fixed-length bonds, with configurations updated through…

Despite their considerable practical and biological applications, the link between molecular properties, assembly conditions and self-organized structure in confined polymer solutions remains elusive. Here, we explore the lyotropic nematic…

In "Width complexes for knots and 3-manifolds," Jennifer Schultens defines the width complex for a knot in order to understand the different positions a knot can occupy in the 3-sphere and the isotopies between these positions. She poses…

Knot theory provides a powerful tool for the understanding of topological matters in biology, chemistry, and physics. Here knot theory is introduced to describe topological phases in the quantum spin system. Exactly solvable models with…

Spatial configurations of randomly charged polymers, known as polyampholytes (PAs), are very sensitive to the overall excess charge Q. Analytical arguments, supported by Monte Carlo simulations and exact enumeration studies, lead to the…

In this paper, we employ Molecular Dynamics computer simulations to study and compare the statics and dynamics of linear and circular (ring) polymer chains in entangled solutions of different densities. While we confirm that linear chain…

We study a model of "elastic" lattice polymer in which a fixed number of monomers $m$ is hosted by a self-avoiding walk with fluctuating length $l$. We show that the stored length density $\rho_m = 1 - <l>/m$ scales asymptotically for large…