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相关论文: Gyration radius of a circular polymer under a topo…

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Several nontrivial properties are shown for the mean square radius of gyration $R_K^2$ of ring polymers with a fixed knot type K. Through computer simulation, we discuss both finite-size and asymptotic behaviors of the gyration radius under…

软凝聚态物质 · 物理学 2009-11-07 Miyuki K. Shimamura , Tetsuo Deguchi

We present computer simulations to examine probability distributions of gyration radius for the no-thickness closed polymers of N straight segments of equal length. We are particularly interested in the conditional distributions when the…

软凝聚态物质 · 物理学 2007-05-23 N. T. Moore , R. Lua , A. Y. Grosberg

One measure of geometrical complexity of a spatial curve is the number of crossings in a planar projection of the curve. For $N$-noded ring polymers with a fixed knot type, we evaluate numerically the average of the crossing number over…

软凝聚态物质 · 物理学 2016-08-31 Miyuki K. Shimamura , Tetsuo Deguchi

We consider the topologically constrained random walk model for topological polymers. In this model, the polymer forms an arbitrary graph whose edges are selected from an appropriate multivariate Gaussian which takes into account the…

统计力学 · 物理学 2022-11-30 Jason Cantarella , Tetsuo Deguchi , Clayton Shonkwiler , Erica Uehara

We investigate the effect of knot type on the properties of a ring polymer confined to a slit. For relatively wide slits, the more complex the knot, the more the force exerted by the polymer on the walls is decreased compared to an…

软凝聚态物质 · 物理学 2014-11-18 R. Matthews , A. A. Louis , J. M. Yeomans

We show that the average size of self-avoiding polygons (SAP) with a fixed knot is much larger than that of no topological constraint if the excluded volume is small and the number of segments is large. We call it topological swelling. We…

软凝聚态物质 · 物理学 2018-01-17 Erica Uehara , Tetsuo Deguchi

Numerical studies of the average size of trivially knotted polymer loops with no excluded volume are undertaken. Topology is identified by Alexander and Vassiliev degree 2 invariants. Probability of a trivial knot, average gyration radius,…

软凝聚态物质 · 物理学 2009-11-10 N. T. Moore , R. Lua , A. Y. Grosberg

We study knotted polymers in equilibrium with an array of obstacles which models confinement in a gel or immersion in a melt. We find a crossover in both the geometrical and the topological behavior of the polymer. When the polymers' radius…

软凝聚态物质 · 物理学 2013-05-29 Enzo Orlandini , Attilio L. Stella , Carlo Vanderzande

For various polymers with different topological structures we numerically evaluate the mean-square radius of gyration and the hydrodynamic radius systematically through simulation. We call polymers with nontrivial topology topological…

软凝聚态物质 · 物理学 2016-11-23 Erica Uehara , Tetsuo Deguchi

Large scale molecular dynamics simulations on graphic processing units (GPUs) are employed to study the scaling behavior of ring polymers with various topological constraints in melts. Typical sizes of rings containing $3_1$, $5_1$ knots…

软凝聚态物质 · 物理学 2015-09-04 Benjamin Trefz , Peter Virnau

Scaling arguments are used to analyze the size of topologically constrained closed ring polymer with excluded volume. It is found that there exists a finite range of polymer thickness (excluded volume) in which self-avoidance is unimportant…

软凝聚态物质 · 物理学 2007-05-23 A. Yu. Grosberg

The size of a zero thickness (no excluded volume) polymer ring is shown to scale with chain length $N$ in the same way as the size of the excluded volume (self-avoiding) linear polymer, as $N^{\nu}$, where $\nu \approx 0.588$. The…

软凝聚态物质 · 物理学 2009-10-31 Alexander Yu. Grosberg

We give two different, statistically consistent definitions of the length l of a prime knot tied into a polymer ring. In the good solvent regime the polymer is modelled by a self avoiding polygon of N steps on cubic lattice and l is the…

统计力学 · 物理学 2015-06-25 B. Marcone , E. Orlandini , A. L. Stella , F. Zonta

We analyze the universal size characteristics of flexible ring polymers in solutions in presence of structural obstacles (impurities) in d dimensions. One encounters such situations when considering polymers in gels, colloidal solutions,…

软凝聚态物质 · 物理学 2014-09-08 K. Haydukivska , V. Blavatska

We discuss the scattering function of a Gaussian random polygon with N nodes under a given topological constraint through simulation. We obtain the Kratky plot of a Gaussian polygon of N=200 having a fixed knot for some different knots such…

软凝聚态物质 · 物理学 2009-11-11 Miyuki K. Shimamura , Kumiko Kamata , Akihisa Yao , Tetsuo Deguchi

Ring polymers are prevalent in natural and engineered systems, including circular bacterial DNA, crown ethers for cation chelation, and mechanical nanoswitches. The morphology and dynamics of ring polymers are governed by the chemistry and…

化学物理 · 物理学 2018-02-07 Jiang Wang , Andrew Ferguson

Twist stiffness and an asymmetric bending stiffness of a polymer or a polymer bundle is captured by the elastic ribbon model. We investigate the effects a ring geometry induces to a thermally fluctuating ribbon, finding bend-bend coupling…

生物大分子 · 定量生物学 2008-02-07 Karen Alim , Erwin Frey

By performing Monte Carlo sampling of $N$-steps self-avoiding polygons embedded on different Bravais lattices we explore the robustness of universality in the entropic, metric and geometrical properties of knotted polymer rings. In…

统计力学 · 物理学 2013-01-21 Marco Baiesi , Enzo Orlandini

The shape of semiflexible polymer rings is studied over their whole range of flexibility. Investigating the joint distribution of asphericity and nature of asphericity as well as their respective averages we find two distinct shape regimes…

生物大分子 · 定量生物学 2008-02-07 Karen Alim , Erwin Frey

The mathematical derivation of the mean square radius of gyration, <s2x>, of branched polymers is reinvestigated from a kinetic-equation-point of view. In particular we derive the corresponding quantity of the A-R-Bf-1 model; the result…

软凝聚态物质 · 物理学 2014-02-27 Kazumi Suematsu
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