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Evolution is simultaneously driven by a number of processes such as mutation, competition and random sampling. Understanding which of these processes is dominating the collective evolutionary dynamics in dependence on system properties is a…

种群与进化 · 定量生物学 2012-09-13 Hinrich Arnoldt , Marc Timme , Stefan Grosskinsky

Diffusion models achieve superior generation quality but suffer from slow generation speed due to the iterative nature of denoising. In contrast, consistency models, a new generative family, achieve competitive performance with…

机器学习 · 计算机科学 2024-12-05 Fu-Yun Wang , Zhengyang Geng , Hongsheng Li

The process of pattern formation for a multi-species model anchored on a time varying network is studied. A non homogeneous perturbation superposed to an homogeneous stable fixed point can amplify, as follows a novel mechanism of…

统计力学 · 物理学 2017-10-11 Julien Petit , Ben Lauwens , Duccio Fanelli , Timoteo Carletti

We study a one-dimensional spatial population model where the population sizes at each site are chosen according to a translation invariant and ergodic distribution and are uniformly bounded away from 0 and infinity. We suppose that the…

概率论 · 数学 2019-06-14 Raphaël Forien

A tumor can be thought of as an ecosystem, which critically means that we cannot just consider it as a collection of mutated cells but more as a complex system of many interacting cellular and microenvironmental elements. At its simplest, a…

种群与进化 · 定量生物学 2013-05-03 Jill Gallaher , Alexander R. A. Anderson

Quantitative predictions about the processes that promote species coexistence are a subject of active research in ecology. In particular, competitive interactions are known to shape and maintain ecological communities, and situations where…

种群与进化 · 定量生物学 2020-01-22 Jose A. Capitan , Sara Cuenda , David Alonso

We are interested in modeling the Darwinian evolution resulting from the interplay of phenotypic variation and natural selection through ecological interactions, in the specific scales of the biological framework of adaptive dynamics.…

概率论 · 数学 2013-02-05 Nicolas Champagnat , Pierre-Emmanuel Jabin , Sylvie Méléard

In order to accommodate the empirical fact that population structures are rarely simple, modern studies of evolutionary dynamics allow for complicated and highly-heterogeneous spatial structures. As a result, one of the most difficult…

种群与进化 · 定量生物学 2022-07-07 Alex McAvoy , John Wakeley

The Kuramoto-Daido model, which describes synchronization phenomena, is a system of ordinary differential equations on $N$-torus defined as coupled harmonic oscillators, whose natural frequencies are drawn from some distribution function.…

动力系统 · 数学 2009-11-30 Hayato Chiba

Large sets of genotypes give rise to the same phenotype because phenotypic expression is highly redundant. Accordingly, a population can accept mutations without altering its phenotype, as long as thegenotype mutates into another one on the…

种群与进化 · 定量生物学 2015-02-18 Susanna Manrubia , José A. Cuesta

Evolutionary dynamics are shaped by a variety of fundamental, generic drivers, including spatial structure, ecology, and selection pressure. These drivers impact the trajectory of evolution, and have been hypothesized to influence…

种群与进化 · 定量生物学 2025-06-04 Matthew Andres Moreno , Santiago Rodriguez-Papa , Emily Dolson

In this paper, we investigate the spreading properties of solutions of the Aoki-Shida-Shigesada model. This model is a three-component reaction-diffusion system that delineates the geographical expansion of an initially localized population…

偏微分方程分析 · 数学 2024-04-02 Dongyuan Xiao , Ryunosuke Mori

Understanding the mechanisms of species coexistence has always been a fundamental topic in ecology. Classical theory predicts that interspecific competition may select for traits that stabilize niche differences, although recent work shows…

种群与进化 · 定量生物学 2023-05-16 José F. Fontanari , Margarida Matos , Mauro Santos

The characterization of plasticity, robustness, and evolvability, an important issue in biology, is studied in terms of phenotypic fluctuations. By numerically evolving gene regulatory networks, the proportionality between the phenotypic…

种群与进化 · 定量生物学 2015-06-15 Kunihiko Kaneko

The Kuramoto model is a paradigmatic tool for studying the dynamics of collective behavior in large ensembles of coupled dynamical systems. Over the past decade a great deal of progress has been made in analytical descriptions of the…

适应与自组织系统 · 物理学 2018-08-15 Per Sebastian Skardal

The dependence of the scaling properties of the structure factor on space dimensionality, range of interaction, initial and final conditions, presence or absence of a conservation law is analysed in the framework of the large-N model for…

凝聚态物理 · 物理学 2009-10-22 Antonio Coniglio , Patrizia Ruggiero , Marco Zannetti

Ecological interactions can dramatically alter evolutionary outcomes in complex communities. Yet, the framework of population genetics largely neglects interactions from a species-rich community. Here, we bridge this gap by using dynamical…

种群与进化 · 定量生物学 2026-04-16 Shing Yan Li , Zhijie Feng , Akshit Goyal , Pankaj Mehta

We consider a system of interacting Fisher-Wright diffusions with seed-bank. Individuals carry type one of two types, live in colonies, and are subject to resampling and migration as long as they are active. Each colony has a structured…

概率论 · 数学 2022-09-22 Andreas Greven , Frank den Hollander

The Kuramoto model, which serves as a paradigm for investigating synchronization phenomenon of oscillatory system, is known to exhibit second-order, i.e., continuous, phase transitions in the macroscopic order parameter. Here, we generalize…

适应与自组织系统 · 物理学 2020-11-04 Can Xu , Xuebin Wang , Per Sebastian Skardal

Mathematical models of spatial population dynamics typically focus on the interplay between dispersal events and birth/death processes. However, for many animal communities, significant arrangement in space can occur on shorter timescales,…

种群与进化 · 定量生物学 2019-06-06 Jonathan R. Potts , Mark A. Lewis