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Artificial Intelligence (AI) incorporating genetic and medical information have been applied in disease risk prediction, unveiling disease mechanism, and advancing therapeutics. However, AI training relies on highly sensitive and private…

While artificial intelligence (AI) has become widespread, many commercial AI systems are not yet accessible to individual researchers nor the general public due to the deep knowledge of the systems required to use them. We believe that AI…

Consent is an ethical cornerstone of clinical research and healthcare in general. Although the ethical principles of consent - providing information, ensuring comprehension, and ensuring voluntariness - are well-defined, the technological…

密码学与安全 · 计算机科学 2026-02-04 Montassar Naghmouchi , Maryline Laurent

RNAnet provides a bridge between two widely used Human gene databases. Ensembl describes DNA sequences and transcripts but not experimental gene expression. Whilst NCBI's GEO contains actual expression levels from Human samples. RNAnet…

分子网络 · 定量生物学 2010-01-26 W. B. Langdon , Olivia Sanchez Graillet , A. P. Harrison

Complex systems are increasingly being viewed as distributed information processing systems, particularly in the domains of computational neuroscience, bioinformatics and Artificial Life. This trend has resulted in a strong uptake in the…

信息论 · 计算机科学 2014-12-04 Joseph T. Lizier

Social networks have become an essential meeting point for millions of individuals willing to publish and consume huge quantities of heterogeneous information. Some studies have shown that the data published in these platforms may contain…

密码学与安全 · 计算机科学 2016-07-05 Alexandre Viejo , David Sánchez

Modern DNA sequencing technologies enable geneticists to rapidly identify genetic variation among many human genomes. However, isolating the minority of variants underlying disease remains an important, yet formidable challenge for medical…

基因组学 · 定量生物学 2015-06-15 Uma Paila , Brad Chapman , Rory Kirchner , Aaron Quinlan

Data commons collate data with cloud computing infrastructure and commonly used software services, tools and applications to create biomedical resources for the large-scale management, analysis, harmonization, and sharing of biomedical…

基因组学 · 定量生物学 2018-12-27 Robert L. Grossman

This paper takes on the problem of automatically identifying clinically-relevant patterns in medical datasets without compromising patient privacy. To achieve this goal, we treat datasets as a black box for both internal and external users…

软件工程 · 计算机科学 2015-01-26 Nafees Qamar , Yilong Yang , Andras Nadas , Zhiming Liu , Janos Sztipanovits

The cost of DNA sequencing has resulted in a surge of genetic data being utilised to improve scientific research, clinical procedures, and healthcare delivery in recent years. Since the human genome can uniquely identify an individual, this…

密码学与安全 · 计算机科学 2022-02-11 Sara Jafarbeiki , Raj Gaire , Amin Sakzad , Shabnam Kasra Kermanshahi , Ron Steinfeld

Typical personal medical data contains sensitive information about individuals. Storing or sharing the personal medical data is thus often risky. For example, a short DNA sequence can provide information that can not only identify an…

密码学与安全 · 计算机科学 2019-02-01 Ho Bae , Dahuin Jung , Sungroh Yoon

GitHub is the world's largest platform for collaborative software development, with over 100 million users. GitHub is also used extensively for open data collaboration, hosting more than 800 million open data files, totaling 142 terabytes…

The switch from a Model-Centric to a Data-Centric mindset is putting emphasis on data and its quality rather than algorithms, bringing forward new challenges. In particular, the sensitive nature of the information in highly regulated…

机器学习 · 计算机科学 2022-04-14 Giorgio Visani , Giacomo Graffi , Mattia Alfero , Enrico Bagli , Davide Capuzzo , Federico Chesani

Investigative journalists collect large numbers of digital documents during their investigations. These documents can greatly benefit other journalists' work. However, many of these documents contain sensitive information. Hence, possessing…

GenoML is a Python package automating machine learning workflows for genomics (genetics and multi-omics) with an open science philosophy. Genomics data require significant domain expertise to clean, pre-process, harmonize and perform…

The surge in high-throughput omics data has reshaped the landscape of biological research, underlining the need for powerful, user-friendly data analysis and interpretation tools. This paper presents GenoCraft, a web-based comprehensive…

The public sector comprises government agencies, ministries, education institutions, health providers and other types of government, commercial and not-for-profit organisations. Unlike commercial enterprises, this environment is highly…

计算机与社会 · 计算机科学 2007-05-23 Max Voskob , Nuck Punin

We present Globalping, an open-source, community-driven platform for scalable, real-time global network measurements. It democratizes access to network diagnostics by offering every user, including non-technicals, technicals, and companies,…

网络与互联网体系结构 · 计算机科学 2026-04-28 Berkay Kaplan

Genome sequencing technology has advanced at a rapid pace and it is now possible to generate highly-detailed genotypes inexpensively. The collection and analysis of such data has the potential to support various applications, including…

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