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The concept of stability has a long history in the field of dynamical systems: stable invariant objects are the ones that would be expected to be observed in experiments and numerical simulations. Heteroclinic networks are invariant objects…

The goal of this work is to identify steady-state solutions to dynamical systems defined on large, random families of networks. We do so by passing to a continuum limit where the adjacency matrix is replaced by a non-local operator with…

动力系统 · 数学 2026-02-26 Jason J. Bramburger , Matt Holzer , Jackson Williams

Boolean networks are special types of finite state time-discrete dynamical systems. A Boolean network can be described by a function from an n-dimensional vector space over the field of two elements to itself. A fundamental problem in…

定量方法 · 定量生物学 2013-07-03 Yi Ming Zou

Using longitudinal study data, we dynamically model how aging affects homeostasis in both mice and humans. We operationalize homeostasis as a multivariate mean-reverting stochastic process. We hypothesize that biomarkers have stable…

其他定量生物学 · 定量生物学 2023-12-14 Glen Pridham , Andrew D. Rutenberg

The harmonic oscillator is a powerful model that can appear as a limit case when examining a nonlinear system. A well known fact is, that without driving, the inclusion of a friction term makes the origin of the phase space -- which is a…

统计力学 · 物理学 2020-09-01 Daniel Schirdewahn

This paper develops a process-based account of scientific explanation that reconceives grounding in terms of stabilisation. Grounding theories capture hierarchical dependence but lack criteria for when explanations remain adequate under…

物理学史与哲学 · 物理学 2026-01-05 Jonathon Sendall

Networked dynamical systems, i.e., systems of dynamical units coupled via nontrivial interaction topologies, constitute models of broad classes of complex systems, ranging from gene regulatory and metabolic circuits in our cells to…

适应与自组织系统 · 物理学 2024-03-12 Xiaozhu Zhang , Marc Timme

Networks are universally considered as complex structures of interactions of large multi-component systems. In order to determine the role that each node has inside a complex network, several centrality measures have been developed. Such…

物理与社会 · 物理学 2019-08-20 Malbor Asllani , Bruno Requiao da Cunha , Ernesto Estrada , James P. Gleeson

For a given unconstrained dynamical system, input redundancy has been recently redefined as the existence of distinct inputs producing identical output for the same initial state. By directly referring to signals, this definition readily…

系统与控制 · 电气工程与系统科学 2023-10-30 Jean-François Trégouët , Jérémie Kreiss

Many statistical estimators are defined as the fixed point of a data-dependent operator, with estimators based on minimizing a cost function being an important special case. The limiting performance of such estimators depends on the…

机器学习 · 计算机科学 2022-03-22 Nhat Ho , Koulik Khamaru , Raaz Dwivedi , Martin J. Wainwright , Michael I. Jordan , Bin Yu

Random boolean networks are a model of genetic regulatory networks that has proven able to describe experimental data in biology. They not only reproduce important phenomena in cell dynamics, but they are also extremely interesting from a…

Biochemical reaction networks are subjected to large fluctuations attributable to small molecule numbers, yet underlie reliable biological functions. Most theoretical approaches describe them as purely deterministic or stochastic dynamical…

分子网络 · 定量生物学 2013-06-11 Jingkui Wang , Marc Lefranc , Quentin Thommen

What is chaos? Despite several decades of research on this ubiquitous and fundamental phenomenon there is yet no agreed-upon answer to this question. Recently, it was realized that all stochastic and deterministic differential equations,…

混沌动力学 · 物理学 2019-09-10 Igor V. Ovchinnikov , Massimiliano Di Ventra

We study the dynamical stability of pulse coupled networks of leaky integrate-and-fire neurons against infinitesimal and finite perturbations. In particular, we compare current versus fluctuations driven networks, the former (latter) is…

无序系统与神经网络 · 物理学 2015-06-18 David Angulo-Garcia , Alessandro Torcini

We introduce a novel model for updating perceptual beliefs about the environment by extending the concept of Allostasis to the control of internal representations. Allostasis is a fundamental regulatory mechanism observed in animal…

神经元与认知 · 定量生物学 2025-03-21 Aung Htet , Alejandro Rodriguez Jimenez , Sarah Hamburg , Alessandro Di Nuovo

Neurons regulate the distribution of signaling components across an extended tree-like cellular structure using both local and global feedback control. This is hypothesized to allow homeostatic control of the electrical activity of a neuron…

适应与自组织系统 · 物理学 2021-04-27 Saeed Aljaberi , Adriano Bellotti , Timothy O'Leary , Fulvio Forni

A stochastic model of excitatory and inhibitory interactions which bears universality traits is introduced and studied. The endogenous component of noise, stemming from finite size corrections, drives robust inter-nodes correlations, that…

无序系统与神经网络 · 物理学 2017-08-16 Clement Zankoc , Duccio Fanelli , Francesco Ginelli , Roberto Livi

Balanced neural networks -- in which excitatory and inhibitory inputs compensate each other on average -- give rise to a dynamical phase dominated by fluctuations called asynchronous state, crucial for brain functioning. However, structural…

统计力学 · 物理学 2024-03-05 Jorge Pretel , Victor Buendía , Joaquín J. Torres , Miguel A. Muñoz

This paper deals with structural controllability of leader-follower networks. The system matrix defining the network dynamics is a pattern matrix in which a priori given entries are equal to zero, while the remaining entries take nonzero…

最优化与控制 · 数学 2018-10-16 Jiajia Jia , Harry L. Trentelman , Wouter Baar , Kanat M. Camlibel

We explore the behaviour of chaotic oscillators in hierarchical networks coupled to an external chaotic system whose intrinsic dynamics is dissimilar to the other oscillators in the network. Specifically, each oscillator couples to the…

混沌动力学 · 物理学 2019-05-22 Sudhanshu Shekhar Chaurasia , Sudeshna Sinha