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A fissioning organism may purge unrepairable damage by bequeathing it preferentially to one of its daughters. Using the mathematical formalism of superprocesses, we propose a flexible class of analytically tractable models that allow quite…

种群与进化 · 定量生物学 2007-05-23 Steven N. Evans , David Steinsaltz

We consider a class of biologically-motivated stochastic processes in which a unicellular organism divides its resources (volume or damaged proteins, in particular) symmetrically or asymmetrically between its progeny. Assuming the final…

定量方法 · 定量生物学 2016-07-20 Andrew Marantan , Ariel Amir

This paper develops a point-mutation model describing the evolutionary dynamics of a population of adult stem cells. Such a model may prove useful for quantitative studies of tissue aging and the emergence of cancer. We consider two modes…

组织与器官 · 定量生物学 2009-11-10 Emmanuel Tannenbaum , James L. Sherley , Eugene I. Shakhnovich

Cycling tissues such as the intestinal epithelium, germ line, and hair follicles, require a constant flux of differentiated cells. These tissues are maintained by a population of stem cells, which generate differentiated progenies and…

细胞行为 · 定量生物学 2013-05-20 Sahand Hormoz

In order to fulfill cell proliferation and differentiation through cellular hierarchy, stem cells can undergo either asymmetric or symmetric divisions. Recent studies pay special attention to the effect of different modes of stem cell…

种群与进化 · 定量生物学 2020-10-08 Zhijie Wu , Yuman Wang , Kun Wang , Da Zhou

Traditionally, it has been held that a central characteristic of stem cells is their ability to divide asymmetrically. Recent advances in inducible genetic labeling provided ample evidence that symmetric stem cell divisions play an…

细胞行为 · 定量生物学 2014-03-05 Leili Shahriyari , Natalia L. Komarova

The rules governing cell division and differentiation are central to understanding the mechanisms of development, aging and cancer. By utilising inducible genetic labelling, recent studies have shown that the clonal population in transgenic…

生物物理 · 物理学 2009-11-13 Allon M. Klein , David P. Doupe , Philip H. Jones , Benjamin D. Simons

A rigorous methodology is proposed to study cell division data consisting in several observed genealogical trees of possibly different shapes. The procedure takes into account missing observations, data from different trees, as well as the…

应用统计 · 统计学 2013-04-15 Benoîte de Saporta , Anne Gégout Petit , Laurence Marsalle

A novel theory for cell differentiation is proposed, based on simulations with interacting artificial cells which have metabolic networks within, and divide into two when the final product is accumulated. Results of simulations with coupled…

adap-org · 物理学 2015-06-30 Kunihiko Kaneko , Tetsuya Yomo

We consider a population model where individuals behave independently from each other and whose genealogy is described by a chronological tree called splitting tree. The individuals have i.i.d. (non-exponential) lifetime durations and give…

概率论 · 数学 2014-05-20 Mathieu Richard

Solving population balance equations, we derive analytical steady-state cell size distributions for single-lineage experiments, such as the mother machine. These experiments are fundamentally different from batch cultures where populations…

种群与进化 · 定量生物学 2023-09-13 Arthur Genthon

Asymmetric segregation of key proteins at cell division -- be it a beneficial or deleterious protein -- is ubiquitous in unicellular organisms and often considered as an evolved trait to increase fitness in a stressed environment. Here, we…

种群与进化 · 定量生物学 2019-02-20 Jie Lin , Jiseon Min , Ariel Amir

Spatial models where growth is limited to the edge of the expansions have been instrumental to understand the population dynamics and the clone size distribution in growing cellular populations, such as microbial colonies and avascular…

种群与进化 · 定量生物学 2022-06-08 Armin Eghdami , Jayson Paulose , Diana Fusco

In most biological studies and processes, cell proliferation and population dynamics play an essential role. Due to this ubiquity, a multitude of mathematical models has been developed to describe these processes. While the simplest models…

种群与进化 · 定量生物学 2012-02-23 J. Hasenauer , D. Schittler , F. Allgower

The asymmetrical inheritance of plasmid DNA, as well as other cellular components, has been shown to be involved in replicative aging. In Saccharomyces cerevisiae, there is an ongoing debate regarding the mechanisms underlying this…

亚细胞过程 · 定量生物学 2017-02-08 Jai Denton , Atiyo Ghosh , Tatiana T. Marquez-Lago

Asymptotic spectral distribution (ASD) of the crosscorrelation matrix is investigated for a random spreading short/long-code asynchronous direct sequence-code division multiple access (DS-CDMA) system. The discrete-time decision statistics…

信息论 · 计算机科学 2008-10-06 Chien-Hwa Hwang

I analyse a model of an evolving network represented as a directed graph; each node corresponds to one molecular species and the links to catalytic interactions between species. Over short timescales the graph remains fixed while relative…

适应与自组织系统 · 物理学 2007-05-23 Sandeep Krishna

We study the long time behavior of an asymmetric size-structured measure-valued growth-fragmentation branching process that models the dynamics of a population of cells taking into account physiological and morphological asymmetry at…

概率论 · 数学 2020-07-20 Bertrand Cloez , Benoîte de Saporta , Tristan Roget

Many unicellular organisms allocate their key proteins asymmetrically between the mother and daughter cells, especially in a stressed environment. A recent theoretical model is able to predict when the asymmetry in segregation of key…

种群与进化 · 定量生物学 2021-08-11 Jiseon Min , Ariel Amir

Cell division timing is critical for cell fate specification and morphogenesis during embryogenesis. How division timings are regulated among cells during development is poorly understood. Here we focus on the comparison of asynchrony of…

定量方法 · 定量生物学 2018-03-14 Wei Liang , Yuxiao Yang , Yusi Fang , Zhongying Zhao , Jie Hu
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