相关论文: L-systems for Measuring Repetitiveness*
We show that the size $\gamma(t_n)$ of the smallest string attractor of the $n$th Thue-Morse word $t_n$ is 4 for any $n\geq 4$, disproving the conjecture by Mantaci et al. [ICTCS 2019] that it is $n$. We also show that $\delta(t_n) =…
Let $S$ be a string of length $n$. In this paper we introduce the notion of \emph{string attractor}: a subset of the string's positions $[1,n]$ such that every distinct substring of $S$ has an occurrence crossing one of the attractor's…
By reformulating a learning process of a set system L as a game between Teacher and Learner, we define the order type of L to be the order type of the game tree, if the tree is well-founded. The features of the order type of L (dim L in…
The \emph{longest common extension} (\emph{LCE}) problem is to preprocess a given string $w$ of length $n$ so that the length of the longest common prefix between suffixes of $w$ that start at any two given positions is answered quickly. In…
We raise the question of approximating the compressibility of a string with respect to a fixed compression scheme, in sublinear time. We study this question in detail for two popular lossless compression schemes: run-length encoding (RLE)…
Motivated by the duplication-correcting problem for data storage in live DNA, we study the construction of constant-weight codes in $\ell_1$-metric. By using packings and group divisible designs in combinatorial design theory, we give…
The transmission (T) and reflection (R) coefficients are studied in periodic systems and random systems with gain. For both the periodic electronic tight-binding model and the periodic classical many-layered model, we obtain numerically and…
Given a regular language L over an ordered alphabet $\Sigma$, the set of lexicographically smallest (resp., largest) words of each length is itself regular. Moreover, there exists an unambiguous finite-state transducer that, on a given word…
A repetition free Longest Common Subsequence (LCS) of two sequences x and y is an LCS of x and y where each symbol may appear at most once. Let R denote the length of a repetition free LCS of two sequences of n symbols each one chosen…
Recently, in a series of papers [32,38,39,41], the ratio of $\ell_1$ and $\ell_2$ norms was proposed as a sparsity inducing function for noiseless compressed sensing. In this paper, we further study properties of such model in the noiseless…
Repetitiveness measures reveal profound characteristics of datasets, and give rise to compressed data structures and algorithms working in compressed space. Alas, the computation of some of these measures is NP-hard, and straight-forward…
Much recent work has shown how cross-linguistic variation is constrained by competing pressures from efficient communication. However, little attention has been paid to the role of the systematicity of forms (regularity), a key property of…
The study of constant-weight codes in $\ell_1$-metric was motivated by the duplication-correcting problem for data storage in live DNA. It is interesting to determine the maximum size of a code given the length $n$, weight $w$, minimum…
The Weisfeiler-Leman (WL) algorithms form a family of incomplete approaches to the graph isomorphism problem. They recently found various applications in algorithmic group theory and machine learning. In fact, the algorithms form a…
We investigate the complexity of short symbolic sequences of chaotic dynamical systems by using lossless compression algorithms. In particular, we study Non-Sequential Recursive Pair Substitution (NSRPS), a lossless compression algorithm…
We propose algorithms that, given the input string of length $n$ over integer alphabet of size $\sigma$, construct the Burrows-Wheeler transform (BWT), the permuted longest-common-prefix (PLCP) array, and the LZ77 parsing in…
In highly repetitive strings, like collections of genomes from the same species, distinct measures of repetition all grow sublinearly in the length of the text, and indexes targeted to such strings typically depend only on one of these…
Computing the {\em matching statistics} of a string $P[1..m]$ with respect to a text $T[1..n]$ is a fundamental problem which has application to genome sequence comparison. In this paper, we study the problem of computing the matching…
The goal of compressed sensing is to learn a structured signal $x$ from a limited number of noisy linear measurements $y \approx Ax$. In traditional compressed sensing, "structure" is represented by sparsity in some known basis. Inspired by…
A suffixient set is a novel combinatorial object that captures the essential information of repetitive strings in a way that, provided with a random access mechanism, supports various forms of pattern matching. In this paper, we study the…