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Humans, domestic animals, orchard crops, and ornamental plants are commonly treated with antibiotics in response to bacterial infection. By curing infectious individuals, antibiotic therapy might limit the spread of contagious disease among…

种群与进化 · 定量生物学 2020-01-22 Thomas Caraco

Small and large scale pandemics are a natural phenomenon repeatably appearing throughout history, causing ecological and biological shifts in ecosystems and a wide range of their habitats. These pandemics usually start with a single strain…

种群与进化 · 定量生物学 2025-09-03 Ariel Alexi , Ariel Rosenfeld , Teddy Lazebnik

We introduce a minimal multiscale framework that links within-host virus dynamics to population-level SIRS epidemiology through explicit, bidirectional coupling. At the microscopic layer, a two variant quasispecies (master and mutant…

This paper conducts research on the established model and presents the main conclusions . Firstly, by separately considering the infectivity of each of the two infectious diseases and the infectivity of the population simultaneously…

种群与进化 · 定量生物学 2025-03-13 Yang Liu

The evolution and emergence of antibiotic resistance is a major public health concern. The understanding of the within-host microbial dynamics combining mutational processes, horizontal gene transfer and resource consumption, is one of the…

种群与进化 · 定量生物学 2020-03-09 Ramsès Djidjou-Demasse , Samuel Alizon , Mircea T. Sofonea

In this paper, the authors develop a method of detecting correlations between epidemic patterns in different regions that are due to human movement and introduce a null model in which the travel-induced correlations are cancelled. They…

种群与进化 · 定量生物学 2008-06-24 Pascal Crépey , Marc Barthélemy

Recent clinical studies have shown that HIV disease pathogenesis can depend strongly on many factors at the time of transmission, including the strength of the initial viral load and the local availability of CD4+ T-cells. In this article,…

种群与进化 · 定量生物学 2019-10-15 Stephen Pankavich , Nathan Neri , Deborah Shutt

COVID-19 has resulted in a public health global crisis. The pandemic control necessitates epidemic models that capture the trends and impacts on infectious individuals. Many exciting models can implement this but they lack practical…

计算机与社会 · 计算机科学 2021-04-13 Ou Deng , Kiichi Tago , Qun Jin

In this paper, we introduce a general framework for co-infection as cooperative SIR dynamics. We first solve analytically CGCG model [1] and then the generalized model in symmetric scenarios. We calculate transition points, order parameter,…

种群与进化 · 定量生物学 2019-07-24 Fatemeh Zarei , Saman Moghimi-Araghi , Fakhteh Ghanbarnejad

Epidemics of infectious diseases have accompanied humans for a long time and, depending on the scale, cause various undesirable social and economic consequences. During the ongoing COVID-19 pandemic, governments of many countries impose…

物理与社会 · 物理学 2020-05-07 Andrzej Szymkowiak , Piotr Kulawik , Kishokanth Jeganathan , Paulina Guzik

We develop a multiple compartment Susceptible-Infected-Recovered (SIR) model to analyze the spread of several infectious diseases through different geographic areas. Additionally, we propose a data-quality sensitive optimization framework…

种群与进化 · 定量生物学 2019-06-21 Inbar Seroussi , Nir Levy , Daniela Paolotti , Nir Sochen , Elad Yom-Tov

Much traditional statistical modelling assumes that the outcome variables of interest are independent of each other when conditioned on the explanatory variables. This assumption is strongly violated in the case of infectious diseases,…

种群与进化 · 定量生物学 2019-11-28 Timothy Kinyanjui , Thomas House

We propose an integral model describing an epidemic of an infectious disease. The model is behavioural in the sense that the constitutive law for the force of infection includes a distributed delay, called "information index", that…

动力系统 · 数学 2024-05-31 Bruno Buonomo , Eleonora Messina , Claudia Panico , Antonia Vecchio

Pandemics, like the 1918 Spanish Influenza and COVID-19, spread through regions of the World in subsequent waves. There is, however, no consensus on the origin of this pattern, which may originate from human behaviour rather than from the…

物理与社会 · 物理学 2020-11-26 Giacomo Cacciapaglia , Corentin Cot , Francesco Sannino

We investigate a model for spatial epidemics explicitly taking into account bi-directional movements between base and destination locations on individual mobility networks. We provide a systematic analysis of generic dynamical features of…

物理与社会 · 物理学 2012-03-07 Vitaly Belik , Theo Geisel , Dirk Brockmann

This paper considers a deterministic Susceptible-Infected-Susceptible (SIS) networked bivirus epidemic model (termed the bivirus model for short), in which two competing viruses spread through a set of populations (nodes) connected by two…

动力系统 · 数学 2024-10-24 Brian D. O. Anderson , Mengbin Ye

It is essential to understand the dynamics of epidemics in the presence of coexisting pathogens. There are various phenomenon that can effect the dynamics. In this paper, we formulate a mathematical model using different assumptions to…

种群与进化 · 定量生物学 2021-11-02 S. Ghersheen , V. Kozlov , U. Wennergren

Most previous studies of epidemic dynamics on complex networks suppose that the disease will eventually stabilize at either a disease-free state or an endemic one. In reality, however, some epidemics always exhibit sporadic and recurrent…

物理与社会 · 物理学 2013-11-19 Xiao-Long Peng , Michael Small , Xin-Jian Xu , Xinchu Fu

In contrast to the many theoretical studies on the transmission of human-mosquitoes malaria infection, few studies have considered a multiple structure model formulations including (i) the chronological age of humans and mosquitoes…

偏微分方程分析 · 数学 2021-01-01 Quentin Richard , Marc Choisy , Thierry Lefèvre , Ramsès Djidjou-Demasse

The viral load is known to be a chief predictor of the risk of transmission of infectious diseases. In this work, we investigate the role of the individuals' viral load in the disease transmission by proposing a new…

适应与自组织系统 · 物理学 2023-03-29 Rossella Della Marca , Nadia Loy , Andrea Tosin