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We combine a pedestrian dynamics model with a contact tracing method to simulate the initial spreading of a highly infectious airborne disease in a confined environment. We focus on a medium size population (up to 1000 people) with a small…

物理与社会 · 物理学 2020-04-22 Krithika Rathinakumar , Annalisa Quaini

We propose a dynamical model for describing the spread of epidemics. This model is an extension of the SIQR (susceptible-infected-quarantined-recovered) and SIRP (susceptible-infected-recovered-pathogen) models used earlier to describe…

物理与社会 · 物理学 2022-12-08 S. P. Lukyanets , I. S. Gandzha , O. V. Kliushnichenko

We study an epidemic model for a constant population by taking into account four compartments of the individuals characterizing their states of health. Each individual is in one of the compartments susceptible (S); incubated - infected yet…

种群与进化 · 定量生物学 2023-04-20 Teo Granger , Thomas M. Michelitsch , Michael Bestehorn , Alejandro P. Riascos , Bernard A. Collet

Nosocomial infections have important consequences for patients and hospital staff: they worsen patient outcomes and their management stresses already overburdened health systems. Accurate judgements of whether an infection is nosocomial…

A key problem in modelling the evolution dynamics of infectious diseases is the mathematical representation of the mechanism of transmission of the contagion. Models with a finite number of subpopulations can be described via systems of…

最优化与控制 · 数学 2017-03-09 Sebastian Anita , Vincenzo Capasso

There has been interest in the interactions between infectious disease dynamics and behaviour for most of the history of mathematical epidemiology. This has included consideration of which mathematical models best capture each phenomenon,…

种群与进化 · 定量生物学 2025-12-09 Matthew Ryan , Roslyn I. Hickson , Edward M. Hill , Thomas House , Valerie Isham , Dongni Zhang , Mick G. Roberts

Within-host models of COVID-19 infection dynamics enable the merits of different forms of antiviral therapy to be assessed in individual patients. A stochastic agent-based model of COVID-19 intracellular dynamics is introduced here, that…

定量方法 · 定量生物学 2021-12-22 Farzad Fatehi , Richard J Bingham , Eric C Dykeman , Peter G Stockley , Reidun Twarock

Infectious pathogens often propagate by superspreading, which focusses onward transmission on disproportionately few infected individuals. At the same time, infector-infectee pairs tend to have more similar transmission potentials than…

种群与进化 · 定量生物学 2025-09-22 Noah Silva de Leonardi , Benjamin D. Dalziel

Viruses evolve in the background of host immune systems that exert selective pressure and drive viral evolutionary trajectories. This interaction leads to different evolutionary patterns in antigenic space. Examples observed in nature…

种群与进化 · 定量生物学 2020-11-20 Jacopo Marchi , Michael Lässig , Thierry Mora , Aleksandra M. Walczak

The use of model experimental systems and mathematical models is important to further understanding of infectious disease dynamics and strategize disease mitigation. Gyrodactylids are helminth ectoparasites of teleost fish which have many…

种群与进化 · 定量生物学 2019-08-30 Christina P. Tadiri , Jude D. Kong , Gregor F. Fussmann , Marilyn E. Scott , Hao Wang

Traditional disease transmission models assume that the infectious period is exponentially distributed with a recovery rate fixed in time and across individuals. This assumption provides analytical and computational advantages, however it…

种群与进化 · 定量生物学 2024-01-30 Laura Di Domenico , Eugenio Valdano , Vittoria Colizza

Many infectious diseases are comprised of multiple strains with examples including Influenza, tuberculosis, and Dengue virus. The time evolution of such systems is linked to a complex landscape shaped by interactions between competing…

种群与进化 · 定量生物学 2023-11-21 Nir Gavish , Musa Rabiu

The spatial structure of populations is a key element in the understanding of the large scale spreading of epidemics. Motivated by the recent empirical evidence on the heterogeneous properties of transportation and commuting patterns among…

种群与进化 · 定量生物学 2008-03-19 Vittoria Colizza , Alessandro Vespignani

The aim of this paper is to study the long-term consequence on longevity of a mortality shock. We adopt an historical and modeling approach to study how the population evolution following a mortality shock such as the COVID-19 pandemic…

种群与进化 · 定量生物学 2021-11-17 Nicole El Karoui , Kaouther Hadji , Sarah Kaakai

Recent work has attempted to use whole-genome sequence data from pathogens to reconstruct the transmission trees linking infectors and infectees in outbreaks. However, transmission trees from one outbreak do not generalize to future…

定量方法 · 定量生物学 2023-10-24 Eben Kenah , Tom Britton , M. Elizabeth Halloran , Ira M. Longini

We propose a fully cooperative coinfection model in which singly infected individuals are more likely to acquire a second disease than those who are susceptible, and doubly infected individuals are also assumed to be more contagious than…

物理与社会 · 物理学 2018-03-14 Jorge P. Rodríguez , Yu-Hao Liang , Jonq Juang

Co-infecting parasites and pathogens remain a leading challenge for global public health due to their consequences for individual-level infection risk and disease progression. However, a clear understanding of the population-level…

The recent COVID-19 pandemic has led to an increasing interest in the modeling and analysis of infectious diseases. The pandemic has made a significant impact on the way we behave and interact in our daily life. The past year has witnessed…

计算机科学与博弈论 · 计算机科学 2021-06-17 Shutian Liu , Yuhan Zhao , Quanyan Zhu

The effective control of infectious diseases relies on accurate assessment of the impact of interventions, which is often hindered by the complex dynamics of the spread of disease. A Beta-Dirichlet switching state-space transmission model…

统计方法学 · 统计学 2024-04-30 Jingxue Feng , Liangliang Wang

We present a study of the worldwide spread of a pandemic influenza and its possible containment at a global level taking into account all available information on air travel. We studied a metapopulation stochastic epidemic model on a global…

其他定量生物学 · 定量生物学 2007-05-23 Vittoria Colizza , Alain Barrat , Marc Barthelemy , Alain-Jacques Valleron , Alessandro Vespignani
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