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Collective synchronization in a large population of self-sustained units appears both in natural and engineered systems. Sometimes this effect is in demand, while in some cases, it is undesirable, which calls for control techniques. In this…

混沌动力学 · 物理学 2024-08-14 Erik T. K. Mau , Michael Rosenblum

We present a model of systems of cells with intracellular oscillators (`clocks'). This is motivated by examples from developmental biology and from the behavior of organisms on the threshold to multicellularity. Cells undergo random motion…

偏微分方程分析 · 数学 2024-02-09 Tilmann Glimm , Daniel Gruszka

Cardiac muscle cells can exhibit complex patterns including irregular behaviour such as chaos or (chaotic) early afterdepolarisations (EADs), which can lead to sudden cardiac death. Suitable mathematical models and their analysis help to…

动力系统 · 数学 2021-01-15 André H. Erhardt , Susanne Solem

In this study, we present a stochastic simulation model designed to explicitly incorporate cell cycle length, overcoming limitations associated with classical compartmental models. Our approach employs a delay mechanism to represent the…

种群与进化 · 定量生物学 2025-04-01 Peter Boldog , Gergely Röst

The paper presents a computational stochastic model of virtual cells irradiation, based on Quasi-Markov Chain Monte Carlo method and using biophysical input. The model is based on a stochastic tree of probabilities for each cell of the…

生物物理 · 物理学 2014-12-23 Krzysztof Wojciech Fornalski

Previous models of the cerebrovascular smooth muscle cell have not addressed the interaction between the electrical, chemical and mechanical components of cell function during the development of active tension. These models are primarily…

细胞行为 · 定量生物学 2013-03-27 Jin Yang , John W. Clark , Robert M. Bryan , Claudia S. Robertson

We discuss open problems related to the stochastic modeling of cardiac function. The work is based on an experimental investigation of the dynamics of heart rate variability (HRV) in the absence of respiratory perturbations. We consider…

生物物理 · 物理学 2015-05-14 I. A. Khovanov , N. A. Khovanova , P. V. E. McClintock , A. Stefanovska

Recently it has been aroused a great interest about explosive (i.e., discontinuous) transitions. They manifest in distinct systems, such as synchronization in coupled oscillators, percolation regime, absorbing phase transitions and more…

统计力学 · 物理学 2017-10-25 Pedro E. Harunari , M. M. de Oliveira , C. E. Fiore

Cell proliferation and cell movement are fundamentally stochastic processes which lead to variability in the growth and spatial structure of cell populations in many biological settings, such as cell invasion, wound healing, and tumour…

细胞行为 · 定量生物学 2026-04-23 John Carlo Dimaculangan , Cameron A. Smith , Christian A. Yates

We present a novel approach which aims at high-performance uncertainty quantification for cardiac electrophysiology simulations. Employing the monodomain equation to model the transmembrane potential inside the cardiac cells, we evaluate…

We investigate numerically and analytically the coupled dynamics of transmembrane voltage and intracellular calcium cycling in paced cardiac cells using a detailed physiological model and its reduction to a three-dimensional discrete map.…

生物物理 · 物理学 2009-11-10 Yohannes Shiferaw , Daisuke Sato , Alain Karma

Biological processes at the cellular level are stochastic in nature, and the immune response system is no different. Therefore, models that attempt to explain this system need to also incorporate noise or fluctuations that can account for…

分子网络 · 定量生物学 2021-06-16 Abhilasha Batra , Rati Sharma

Stochastic dynamic models have been extensively used for the description of processes with uncertainties arising in the operations research, behavioral sciences, and many other application areas. A large class of the problems from these…

数值分析 · 数学 2021-06-01 Thi Kim Thoa Thieu , Roderick Melnik

The circulatory system, comprising the heart and blood vessels, is vital for nutrient transport, waste removal, and homeostasis. Traditional computational models often treat cardiac electromechanics and blood flow dynamics separately,…

The bidomain system of degenerate reaction-diffusion equations is a well-established spatial model of electrical activity in cardiac tissue, with "reaction" linked to the cellular action potential and "diffusion" representing current flow…

偏微分方程分析 · 数学 2018-03-26 Mostafa Bendahmane , Kenneth H. Karlsen

We investigate a map-based model of paced cardiac muscle in the presence of closed-loop feedback control. The model relates the duration of an action potential to the preceding diastolic interval as well as the preceding action potential…

生物物理 · 物理学 2009-11-10 Elena Tolkacheva , Monica M. Romeo , Daniel J. Gauthier

We propose a general approach to the question of how biological rhythms spontaneously self-regulate, based on the concept of ``stochastic feedback''. We illustrate this approach by considering the neuroautonomic regulation of the heart…

统计力学 · 物理学 2009-10-30 Plamen Ch. Ivanov , Luis A. N. Amaral , Ary Goldberger , H. Eugene Stanley

A general stochastic traffic cellular automaton (CA) model, which includes slow-to-start effect and driver's perspective, is proposed in this paper. It is shown that this model includes well known traffic CA models such as…

统计力学 · 物理学 2007-05-23 Satoshi Sakai , Katsuhiro Nishinari , Shinji Iida

Recent research is revealing how cognitive processes are supported by a complex interplay between the brain and the rest of the body, which can be investigated by the analysis of physiological features such as breathing rhythms, heart rate,…

定量方法 · 定量生物学 2023-03-10 Fernando E. Rosas , Diego Candia-Rivera , Andrea I Luppi , Yike Guo , Pedro A. M. Mediano

Global strategies to contain a pandemic, such as social distancing and protective measures, are designed to reduce the overall transmission rate between individuals. Despite such measures, essential institutions, including hospitals,…

种群与进化 · 定量生物学 2022-09-07 Roberto Morán-Tovar , Henning Gruell , Florian Klein , Michael Lässig