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The SARS-CoV-2 coronavirus, the etiologic agent responsible for COVID-19 coronavirus disease, is a global threat. To better understand viral tropism, we assessed the RNA expression of the coronavirus receptor, ACE2, as well as the viral S…

细胞行为 · 定量生物学 2020-04-27 Waradon Sungnak , Ni Huang , Christophe Bécavin , Marijn Berg , HCA Lung Biological Network

A world-wide COVID-19 pandemic intensified strongly the studies of molecular mechanisms related to the coronaviruses. The origin of coronaviruses and the risks of human-to-human, animal-to-human, and human-to-animal transmission of…

其他定量生物学 · 定量生物学 2021-08-25 Vladimir R. Chechetkin , Vasily V. Lobzin

Human genes required for SARS-CoV-2 entry into human cells, ACE2 and FURIN, were employed as baits to build genomics-guided maps of up-stream regulatory elements, their expression and functions in human body, including…

基因组学 · 定量生物学 2020-03-31 Gennadi Glinsky

COVID-19 is an infection caused by SARS-CoV-2 (Severe Acute Respiratory Syndrome coronavirus 2), which has caused a global outbreak. Current research efforts are focused on the understanding of the molecular mechanisms involved in…

Spike (S) glycoproteins mediate the coronavirus entry into the host cell. The S1 subunit of S-proteins contains the receptor-binding domain (RBD) that is able to recognize different host receptors, highlighting its remarkable capacity to…

生物大分子 · 定量生物学 2020-12-23 Patrícia P. D. Carvalho , Nelson A. Alves

The recent zoonotic coronavirus virus outbreak of a novel type [COVID 19] has necessitated the adequate understanding of the evolutionary pathway of zoonotic viruses which adversely affects human populations for therapeutic constructs to…

COVID-19 pandemic, is still unknown and is an important open question. There are speculations that bats are a possible origin. Likewise, there are many closely related (corona-) viruses, such as SARS, which was found to be transmitted…

基因组学 · 定量生物学 2022-01-10 Sarwan Ali , Babatunde Bello , Prakash Chourasia , Ria Thazhe Punathil , Yijing Zhou , Murray Patterson

The BReast CAncer type 2 susceptibility protein (BRCA2) responds to DNA damage by participating in homology-directed repair. BRCA2 deficiency culminates in defective DNA damage repair (DDR) that when prolonged leads to the accumulation of…

Although lessons have been learned from previous severe acute respiratory syndrome (SARS) and Middle East respiratory syndrome (MERS) outbreaks, the rapid evolution of the viruses means that future outbreaks of a much larger scale are…

种群与进化 · 定量生物学 2022-05-12 Zi Hian Tan , Kian Yan Yong , Jian-Jun Shu

Specific elements of viral genomes regulate interactions within host cells. Here, we calculated the secondary structure content of >2500 coronaviruses and computed >100000 human protein interactions with severe acute respiratory syndrome…

生物大分子 · 定量生物学 2020-04-30 Andrea Vandelli , Michele Monti , Edoardo Milanetti , Riccardo Delli Ponti , Gian Gaetano Tartaglia

A manuscript identified bat sarbecoviruses with high sequence homology to SARS-CoV-2 found in caves in Laos that can directly infect human cells via the human ACE2 receptor (Coronaviruses with a SARS-CoV-2-like receptor binding domain…

基因组学 · 定量生物学 2021-12-16 Steven Carl Quay

Enveloped viruses enter host cells either through endocytosis, or by direct fusion of the viral membrane envelope and the membrane of the host cell. However, some viruses, such as HIV-1, HSV-1, and Epstein-Barr can enter a cell through…

亚细胞过程 · 定量生物学 2009-11-13 Sarah A. Nowak , Tom Chou

The absence of a conventional association between the cell-cell cohabitation and its emergent dynamics into cliques during development has hindered our understanding of how cell populations proliferate, differentiate, and compete, i.e. the…

机器学习 · 计算机科学 2022-10-11 Baihan Lin

The COVID-19 pandemic caused by the Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) has spurred unprecedented and concerted worldwide research to curtail and eradicate this pathogen. SARS-CoV-2 has four structural proteins:…

生物物理 · 物理学 2022-09-26 Siyu Li , Roya Zandi

Two distinct families of pan-primate endogenous retroviruses, namely HERVL and HERVH, infected primates germline, colonized host genomes, and evolved into the global retroviral genomic regulatory dominion (GRD) operating during human…

基因组学 · 定量生物学 2025-12-30 Gennadi Glinsky

The reason of significantly higher transmissibility of SARS Covid (2019 CoV-2) compared to SARS Covid (2003 CoV) and MERS Covid (2012 MERS) can be attributed to mutations reported in structural proteins, and the role played by…

生物大分子 · 定量生物学 2022-02-25 Raju Hazari , P Pal Chaudhuri

We examine immunostaining experimental data for the formation of the strip 2 of $even-skipped$ ($eve$) transcripts on $D.$ $melanogaster$ embryos. An estimate of the factor converting immunofluorescence intensity units into molecular…

亚细胞过程 · 定量生物学 2016-02-10 Guilherme N. Prata , José Eduardo M. Hornos , Alexandre F. Ramos

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is the causative agent of the current global COVID-19 pandemic, in which millions of lives have been lost. Understanding the zoonotic evolution of the coronavirus may provide…

种群与进化 · 定量生物学 2022-01-04 Changchuan Yin

The COVID-19 pandemic demands assimilation of all available biomedical knowledge to decode its mechanisms of pathogenicity and transmission. Despite the recent renaissance in unsupervised neural networks for decoding unstructured natural…

Individual expression profiles from EBV transformed cell lines are an emerging resource for genomic investigation. In this study we characterize the effects of age, sex, and genetic variation on gene expression by surveying public datasets…

基因组学 · 定量生物学 2009-11-03 Manuel A. Rivas , Mark J. Daly , Itsik Pe'er
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