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In this paper we use the theory of barcodes as a new tool for studying dynamics of area-preserving homeomorphisms. We will show that the barcode of a Hamiltonian diffeomorphism of a surface depends continuously on the diffeomorphism, and…

辛几何 · 数学 2021-12-08 Frédéric Le Roux , Sobhan Seyfaddini , Claude Viterbo

Methods of topological data analysis have been successfully applied in a wide range of fields to provide useful summaries of the structure of complex data sets in terms of topological descriptors, such as persistence diagrams. While there…

代数拓扑 · 数学 2020-12-08 Lida Kanari , Adélie Garin , Kathryn Hess

Computational topologists recently developed a method, called persistent homology to analyze data presented in terms of similarity or dissimilarity. Indeed, persistent homology studies the evolution of topological features in terms of a…

定量方法 · 定量生物学 2017-08-01 Pavel Petrov , Stephen T Rush , Zhichun Zhai , Christine H Lee , Peter T Kim , Giseon Heo

Many biochemical measurements define state spaces that are bounded, absorbing, and physically irreversible, yet are routinely analysed using linear and Euclidean frameworks that assume global invertibility, symmetry, and translation…

定量方法 · 定量生物学 2026-01-21 James N. Cobley

A theory of modules over posets is developed to define computationally feasible, topologically interpretable data structures, in terms of birth and death of homology classes, for persistent homology with multiple real parameters. To replace…

代数拓扑 · 数学 2020-08-13 Ezra Miller

Persistent homology is a natural tool for probing the topological characteristics of weighted graphs, essentially focusing on their $0$-dimensional homology. While this area has been substantially studied, we present a new approach to…

代数拓扑 · 数学 2023-10-03 Omer Bobrowski , Primoz Skraba

Persistent homology enables fast and computable comparison of topological objects. However, it is naturally limited to the analysis of topological spaces. We extend the theory of persistence, by guaranteeing robustness and computability to…

组合数学 · 数学 2020-09-16 Mattia G. Bergomi , Massimo Ferri , Pietro Vertechi , Lorenzo Zuffi

Abstractly, tropical hyperelliptic curves are metric graphs that admit a two-to-one harmonic morphism to a tree. They also appear as embedded tropical curves in the plane arising from triangulations of polygons with all interior lattice…

代数几何 · 数学 2019-12-17 Ralph Morrison

Persistent homology has become an important tool for extracting geometric and topological features from data, whose multi-scale features are summarized in a persistence diagram. From a statistical perspective, however, persistence diagrams…

Finding an optimal parameter of a black-box function is important for searching stable material structures and finding optimal neural network structures, and Bayesian optimization algorithms are widely used for the purpose. However, most of…

机器学习 · 计算机科学 2019-02-27 Tatsuya Shiraishi , Tam Le , Hisashi Kashima , Makoto Yamada

Hyperuniformity, the suppression of density fluctuations at large length scales, is observed across a wide variety of domains, from cosmology to condensed matter and biological systems. Although the standard definition of hyperuniformity…

统计力学 · 物理学 2024-05-07 Marco Salvalaglio , Dominic J. Skinner , Jörn Dunkel , Axel Voigt

Magnitude homology is an emerging framework that captures the intrinsic topological and geometric features of metric spaces, demonstrating significant potential for topoplogical data analysis and geometric data analysis. This work…

代数拓扑 · 数学 2026-01-08 Wanying Bi , Hongsong Feng , Jingyan Li , Jie Wu

The proof of the theorem, which states that the Euclidean metric on the set of random points in an $n$-dimensional Euclidean space with the distribution of a special class, converges in probability in the limit $n\rightarrow\infty$ to the…

数学物理 · 物理学 2014-04-22 Alexander P. Zubarev

Topological data analysis can extract effective information from higher-dimensional data. Its mathematical basis is persistent homology. The persistent homology can calculate topological features at different spatiotemporal scales of the…

代数拓扑 · 数学 2023-09-29 Dinghua Shi , Zhifeng Chen , Chuang Ma , Guanrong Chen

This paper brings together three distinct theories with the goal of quantifying shape textures with complex morphologies. Distance fields are central objects in shape representation, while topological data analysis uses algebraic topology…

代数拓扑 · 数学 2023-07-04 Anna Song , Ka Man Yim , Anthea Monod

Real-valued functions on geometric data -- such as node attributes on a graph -- can be optimized using descriptors from persistent homology, allowing the user to incorporate topological terms in the loss function. When optimizing a single…

计算几何 · 计算机科学 2024-09-02 Luis Scoccola , Siddharth Setlur , David Loiseaux , Mathieu Carrière , Steve Oudot

While topological data analysis has emerged as a powerful paradigm for structural inference, its foundational tools, notably persistent homology and the persistent Laplacian, are frequently insensitive to localized structural fluctuations…

代数拓扑 · 数学 2026-03-10 Jian Liu , Hongsong Feng , Kefeng Liu

We redevelop persistent homology (topological persistence) from a categorical point of view. The main objects of study are diagrams, indexed by the poset of real numbers, in some target category. The set of such diagrams has an interleaving…

代数拓扑 · 数学 2014-05-13 Peter Bubenik , Jonathan A. Scott

Persistent homology analysis provides means to capture the connectivity structure of data sets in various dimensions. On the mathematical level, by defining a metric between the objects that persistence attaches to data sets, we can…

机器学习 · 计算机科学 2019-06-12 Henri Riihimäki , José Licón-Saláiz

Persistent Homology is a widely used topological data analysis tool that creates a concise description of the topological properties of a point cloud based on a specified filtration. Most filtrations used for persistent homology depend…

代数拓扑 · 数学 2024-06-05 Vincent P. Grande , Michael T. Schaub