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In this paper we consider the problem of the strict self-assembly of infinite fractals within tile self-assembly. In particular, we provide tile assembly algorithms for the assembly of the discrete Sierpinski triangle and the discrete…

In this paper, we prove that in the abstract Tile Assembly Model (aTAM), an accretion-based model which only allows for a single tile to attach to a growing assembly at each step, there are no tile assembly systems capable of…

新兴技术 · 计算机科学 2018-07-18 Jacob Hendricks , Joseph Opseth , Matthew Patitz , Scott Summers

In this paper, we present high-level overviews of tile-based self-assembling systems capable of producing complex, infinite, aperiodic structures known as discrete self-similar fractals. Fractals have a variety of interesting mathematical…

新兴技术 · 计算机科学 2016-12-26 Jacob Hendricks , Meagan Olsen , Matthew J. Patitz , Trent A. Rogers , Hadley Thomas

It is well known that the discrete Sierpinski triangle can be defined as the nonzero residues modulo 2 of Pascal's triangle, and that from this definition one can easily construct a tileset with which the discrete Sierpinski triangle…

其他计算机科学 · 计算机科学 2009-01-22 Steven M. Kautz , James I. Lathrop

In this paper, we search for {\it absolute} limitations of the Tile Assembly Model (TAM), along with techniques to work around such limitations. Specifically, we investigate the self-assembly of fractal shapes in the TAM. We prove that no…

计算复杂性 · 计算机科学 2008-04-26 Matthew J. Patitz , Scott M. Summers

This paper gives a (polynomial time) algorithm to decide whether a given Discrete Self-Similar Fractal Shape can be assembled in the aTAM model.In the positive case, the construction relies on a Self-Assembling System in the aTAM which…

离散数学 · 计算机科学 2024-06-04 Florent Becker

We demonstrate existence of a tile assembly system that self-assembles the statistically self-similar Sierpinski Triangle in the Winfree-Rothemund Tile Assembly Model. This appears to be the first paper that considers self-assembly of a…

计算复杂性 · 计算机科学 2011-07-21 Aaron Sterling

This paper answers a long-standing open question in tile-assembly theory, namely that it is possible to strictly assemble discrete self-similar fractals (DSSFs) in the abstract Tile-Assembly Model (aTAM). We prove this in 2 separate ways,…

计算几何 · 计算机科学 2024-10-11 Florent Becker , Daniel Hader , Matthew J. Patitz

Self-assembly is a process which is ubiquitous in natural, especially biological systems. It occurs when groups of relatively simple components spontaneously combine to form more complex structures. While such systems have inspired a large…

计算几何 · 计算机科学 2018-07-19 Jerome Durand-Lose , Jacob Hendricks , Matthew J. Patitz , Ian Perkins , Michael Sharp

The well-studied Two-Handed Tile Assembly Model (2HAM) is a model of tile assembly in which pairs of large assemblies can bind, or self-assemble, together. In order to bind, two assemblies must have matching glues that can simultaneously…

In this paper, we extend existing results about simulation and intrinsic universality in a model of tile-based self-assembly. Namely, we work within the 2-Handed Assembly Model (2HAM), which is a model of self-assembly in which assemblies…

计算几何 · 计算机科学 2015-03-17 Jacob Hendricks , Matthew J. Patitz , Trent A. Rogers

The Tile Assembly Model is a Turing universal model that Winfree introduced in order to study the nanoscale self-assembly of complex (typically aperiodic) DNA crystals. Winfree exhibited a self-assembly that tiles the first quadrant of the…

计算复杂性 · 计算机科学 2015-05-18 Jack H. Lutz , Brad Shutters

The 2-Handed Assembly Model (2HAM) is a tile-based self-assembly model in which, typically beginning from single tiles, arbitrarily large aggregations of static tiles combine in pairs to form structures. The Signal-passing Tile Assembly…

新兴技术 · 计算机科学 2013-12-16 Tyler Fochtman , Jacob Hendricks , Jennifer E. Padilla , Matthew J. Patitz , Trent A. Rogers

A \emph{pier fractal} is a discrete self-similar fractal whose generator contains at least one \emph{pier}, that is, a member of the generator with exactly one adjacent point. Tree fractals and pinch-point fractals are special cases of pier…

计算几何 · 计算机科学 2014-06-18 David Furcy , Scott M. Summers

We give a short, self-contained analytic proof of the existence of self-similar Dirichlet forms on pillow-type carpets, a family of infinitely ramified fractals that includes the Sierpi\'nski carpet.

动力系统 · 数学 2026-01-19 Shiping Cao , Hua Qiu , Yizhou Wang

In this paper, we show that any scaled-up version of any discrete self-similar {\it tree} fractal does not strictly self-assemble, at any temperature, in Winfree's abstract Tile Assembly Model.

计算几何 · 计算机科学 2014-11-13 Kimberly Barth , David Furcy , Scott M. Summers , Paul Totzke

The algorithmic self-assembly of shapes has been considered in several models of self-assembly. For the problem of \emph{shape construction}, we consider an extended version of the Two-Handed Tile Assembly Model (2HAM), which contains…

计算几何 · 计算机科学 2016-08-18 Austin Luchsinger , Robert Schweller , Tim Wylie

Winfree (1998) showed that discrete Sierpinski triangles can self-assemble in the Tile Assembly Model. A striking molecular realization of this self-assembly, using DNA tiles a few nanometers long and verifying the results by atomic-force…

离散数学 · 计算机科学 2009-03-11 James I. Lathrop , Jack H. Lutz , Scott M. Summers

Self-assembly is ubiquitous in nature, particularly in biology, where it underlies the formation of protein quaternary structure and protein aggregation. Quaternary structure assembles deterministically and performs a wide range of…

新兴技术 · 计算机科学 2016-04-27 S. Tesoro , S. E. Ahnert

We study derivations and Fredholm modules on metric spaces with a local regular conservative Dirichlet form. In particular, on finitely ramified fractals, we show that there is a non-trivial Fredholm module if and only if the fractal is not…

算子代数 · 数学 2018-06-29 Marius Ionescu , Luke G. Rogers , Alexander Teplyaev
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