相关论文: Computing Abelian regularities on RLE strings

In the problem of the longest common substring with $k$ mismatches we are given two strings $X, Y$ and must find the maximal length $\ell$ such that there is a length-$\ell$ substring of $X$ and a length-$\ell$ substring of $Y$ that differ…

A border u of a word w is a proper factor of w occurring both as a prefix and as a suffix. The maximal unbordered factor of w is the longest factor of w which does not have a border. Here an O(n log n)-time with high probability (or O(n log…

Many quantum computing workflows manipulate long lists of Pauli strings. A basic classical subroutine involves taking $m$ Pauli strings on $n$ qubits, each of weight bounded by a constant, to determine if they are pairwise commuting,…

In this paper we undertake the general study of the Abelian complexity of an infinite word on a finite alphabet. We investigate both similarities and differences between the Abelian complexity and the usual subword complexity. While the…

An absent factor of a string $w$ is a string $u$ which does not occur as a contiguous substring (a.k.a. factor) inside $w$. We extend this well-studied notion and define absent subsequences: a string $u$ is an absent subsequence of a string…

The combinatorics of squares in a word depends on how the equivalence of halves of the square is defined. We consider Abelian squares, parameterized squares, and order-preserving squares. The word $uv$ is an Abelian (parameterized,…

We study the abelian period sets of Sturmian words, which are codings of irrational rotations on a one-dimensional torus. The main result states that the minimum abelian period of a factor of a Sturmian word of angle $\alpha$ with continued…

In this paper we investigate local to global phenomena for a new family of complexity functions of infinite words indexed by $k \in \Ni \cup \{+\infty\}$ where $\Ni$ denotes the set of positive integers. Two finite words $u$ and $v$ in…

In this paper we introduce a new family of string processing problems. We are given two or more strings and we are asked to compute a factor common to all strings that preserves a specific property and has maximal length. Here we consider…

Generalized abelian equivalence compares words by their factors up to a certain bounded length. The associated complexity function counts the equivalence classes for factors of a given size of an infinite sequence. How practical is this…

A string $w$ is called a minimal absent word (MAW) for a string $S$ if $w$ does not occur as a substring in $S$ and all proper substrings of $w$ occur in $S$. MAWs are well-studied combinatorial string objects that have potential…

Non-Abelian global strings are expected to form during the chiral phase transition. They have orientational zero modes in the internal space, associated with the vector-like symmetry SU(N)_{L+R} broken in the presence of strings. The…

In this paper we revisit the classical regular expression matching problem, namely, given a regular expression $R$ and a string $Q$, decide if $Q$ matches one of the strings specified by $R$. Let $m$ and $n$ be the length of $R$ and $Q$,…

Dot plots are a standard method for local comparison of biological sequences. In a dot plot, a substring to substring distance is computed for all pairs of fixed-size windows in the input strings. Commonly, the Hamming distance is used…

Abelian complexity of a word $\mathbf{u}$ is a function that counts the number of pairwise non-abelian-equivalent factors of $\mathbf{u}$ of length $n$. We prove that for any $c$-balanced Parry word $\mathbf{u}$, the values of the abelian…

We study quantum algorithms for several fundamental string problems, including Longest Common Substring, Lexicographically Minimal String Rotation, and Longest Square Substring. These problems have been widely studied in the stringology…

It is well-known that checking whether a given string $w$ matches a given regular expression $r$ can be done in quadratic time $O(|w|\cdot |r|)$ and that this cannot be improved to a truly subquadratic running time of $O((|w|\cdot…

Squares (fragments of the form $xx$, for some string $x$) are arguably the most natural type of repetition in strings. The basic algorithmic question concerning squares is to check if a given string of length $n$ is square-free, that is,…

Longest common extension queries (LCE queries) and runs are ubiquitous in algorithmic stringology. Linear-time algorithms computing runs and preprocessing for constant-time LCE queries have been known for over a decade. However, these…

We present an efficient algorithm for finding all approximate occurrences of a given pattern $p$ of length $m$ in a text $t$ of length $n$ allowing for translocations of equal length adjacent factors and inversions of factors. The algorithm…