相关论文: Computing Abelian regularities on RLE strings

We consider string matching with variable length gaps. Given a string $T$ and a pattern $P$ consisting of strings separated by variable length gaps (arbitrary strings of length in a specified range), the problem is to find all ending…

We evaluate the influence of different alphabet orderings on the Lyndon factorization of a string. Experiments with Pizza & Chili datasets show that for most alphabet reorderings, the number of Lyndon factors is usually small, and the…

The classical pattern matching asks for locating all occurrences of one string, called the pattern, in another, called the text, where a string is simply a sequence of characters. Due to the potential practical applications, it is desirable…

Two permutations $(x_1,\dots,x_w)$ and $(y_1,\dots,y_w)$ are weakly similar if $x_i<x_{i+1}$ if and only if $y_i<y_{i+1}$ for all $1\leqslant i \leqslant w$. Let $\pi$ be a permutation of the set $[n]=\{1,2,\dots, n\}$ and let $wt(\pi)$…

We present an algorithm computing the longest periodic subsequence of a string of length $n$ in $O(n^7)$ time with $O(n^4)$ words of space. We obtain improvements when restricting the exponents or extending the search allowing the reported…

Burrows-Wheeler transform (BWT) is an invertible text transformation that, given a text $T$ of length $n$, permutes its symbols according to the lexicographic order of suffixes of $T$. BWT is one of the most heavily studied algorithms in…

A finite word u is said to be bordered if u has a proper prefix which is also a suffix of u, and unbordered otherwise. Ehrenfeucht and Silberger proved that an infinite word is purely periodic if and only if it contains only finitely many…

We propose efficient algorithms for enumerating maximal common subsequences (MCSs) of two strings. Efficiency of the algorithms are estimated by the preprocessing-time, space, and delay-time complexities. One algorithm prepares a…

The first two authors have shown [KK99,KK00] that the sum the exponent (and thus the number) of maximal repetitions of exponent at least 2 (also called runs) is linear in the length of the word. The exponent 2 in the definition of a run may…

Lempel-Ziv (LZ77) factorization is a fundamental problem in string processing: Greedily partition a given string $T$ from left to right into blocks (called phrases) so that each phrase is either the leftmost occurrence of a letter or the…

In this note, we first introduce a new problem called the longest common subsequence and substring problem. Let $X$ and $Y$ be two strings over an alphabet $\Sigma$. The longest common subsequence and substring problem for $X$ and $Y$ is to…

Regularities in strings are often related to periods and covers, which have extensively been studied, and algorithms for their efficient computation have broad application. In this paper we concentrate on computing cyclic regularities of…

We study the classical approximate string matching problem, that is, given strings $P$ and $Q$ and an error threshold $k$, find all ending positions of substrings of $Q$ whose edit distance to $P$ is at most $k$. Let $P$ and $Q$ have…

The normalized substring complexity $\delta$ of a string is defined as $\max_k \{c[k]/k\}$, where $c[k]$ is the number of \textit{distinct} substrings of length $k$. This simply defined measure has recently attracted attention due to its…

Finding the longest common subsequence in $k$-length substrings (LCS$k$) is a recently proposed problem motivated by computational biology. This is a generalization of the well-known LCS problem in which matching symbols from two sequences…

String matching is the problem of finding all the substrings of a text which match a given pattern. It is one of the most investigated problems in computer science, mainly due to its very diverse applications in several fields. Recently,…

Piecewise testable languages are a subclass of the regular languages. There are many equivalent ways of defining them; Simon's congruence $\sim_k$ is one of the most classical approaches. Two words are $\sim_k$-equivalent if they have the…

A border of a string is a non-empty prefix of the string that is also a suffix of the string, and a string is unbordered if it has no border other than itself. Loptev, Kucherov, and Starikovskaya [CPM 2015] conjectured the following: If we…

A regular continuant is the denominator $K$ of a terminating regular continued fraction, interpreted as a function of the partial quotients. We regard $K$ as a function defined on the set of all finite words on the alphabet $1<2<3<\dots$…

Return words constitute a powerful tool for studying symbolic dynamical systems. They may be regarded as a discrete analogue of the first return map in dynamical systems. In this paper we investigate two abelian variants of the notion of…