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A well-established model for the genealogy of a large population in equilibrium is Kingman's coalescent. For the population together with its genealogy evolving in time, this gives rise to a time-stationary tree-valued process. We study the…

概率论 · 数学 2010-05-18 Peter Pfaffelhuber , Anton Wakolbinger , Heinz Weisshaupt

In the Kingman coalescent tree the length of order $r$ is defined as the sum of the lengths of all branches that support $r$ leaves. For $r=1$ these branches are external, while for $r\ge2$ they are internal and carry a subtree with $r$…

概率论 · 数学 2015-05-29 Iulia Dahmer , Götz Kersting

In the case of neutral populations of fixed sizes in equilibrium whose genealogies are described by the Kingman $N$-coalescent back from time $t$ consider the associated processes of total tree length as $t$ increases. We show that the…

概率论 · 数学 2015-02-03 Iulia Dahmer , Robert Knobloch , Anton Wakolbinger

Kingman's coalescent is a random tree that arises from classical population genetic models such as the Moran model. The individuals alive in these models correspond to the leaves in the tree and the following two laws of large numbers…

概率论 · 数学 2014-06-24 Andrej Depperschmidt , Peter Pfaffelhuber , Annika Scheuringer

$\Lambda$-coalescents model genealogies of samples of individuals from a large population by means of a family tree whose branches have lengths. The tree's leaves represent the individuals, and the lengths of the adjacent edges indicate the…

概率论 · 数学 2019-09-12 Christina S. Diehl , Götz Kersting

The classical model for the genealogies of a neutrally evolving population in a fixed environment is due to Kingman. Kingman's coalescent process, which produces a binary tree, universally emerges from many microscopic models in which the…

种群与进化 · 定量生物学 2023-12-05 Ethan Levien

The nested Kingman coalescent describes the ancestral tree of a population undergoing neutral evolution at the level of individuals and at the level of species, simultaneously. We study the speed at which the number of lineages descends…

Take a continuous-time Galton-Watson tree. If the system survives until a large time $T$, then choose $k$ particles uniformly from those alive. What does the ancestral tree drawn out by these $k$ particles look like? Some special cases are…

概率论 · 数学 2019-02-14 Simon C. Harris , Samuel G. G. Johnston , Matthew I. Roberts

In mathematical population genetics, it is well known that one can represent the genealogy of a population by a tree, which indicates how the ancestral lines of individuals in the population coalesce as they are traced back in time. As the…

概率论 · 数学 2014-02-20 Götz Kersting , Jason Schweinsberg , Anton Wakolbinger

Coalescent processes, including mutation, are derived from Moran type population models admitting large offspring numbers. Including mutation in the coalescent process allows for quantifying the turnover of alleles by computing the…

种群与进化 · 定量生物学 2012-12-11 Bjarki Eldon

We study the evolution of the population genealogy in the classic neutral Moran Model of finite size and in discrete time. The stochastic transformations that shape a Moran population can be realized directly on its genealogy and give rise…

种群与进化 · 定量生物学 2019-02-08 Johannes Wirtz , Thomas Wiehe

We consider a class of density-dependent branching processes which generalises exponential, logistic and Gompertz growth. A population begins with a single individual, grows exponentially initially, and then growth may slow down as the…

概率论 · 数学 2022-04-11 David Cheek

This paper gives a new flavor of what Peter Jagers and his co-authors call `the path to extinction'. In a neutral population with constant size $N$, we assume that each individual at time $0$ carries a distinct type, or allele. We consider…

概率论 · 数学 2026-01-14 Guillaume Achaz , Amaury Lambert , Emmanuel Schertzer

We introduce a colored coalescent process which recovers random colored genealogical trees. Here a colored genealogical tree has its vertices colored black or white. Moving backward along the colored genealogical tree, the color of vertices…

概率论 · 数学 2007-05-23 Jianjun Tian , Xiao-Song Lin

In this paper we prove asymptotic normality of the total length of external branches in Kingman's coalescent. The proof uses an embedded Markov chain, which can be descriped as follows: Take an urn with n black balls. Empty it in n steps…

概率论 · 数学 2011-01-18 Svante Janson , Götz Kersting

We investigate a new model for populations evolving in a spatial continuum. This model can be thought of as a spatial version of the Lambda-Fleming-Viot process. It explicitly incorporates both small scale reproduction events and large…

概率论 · 数学 2010-03-22 N. H. Barton , A. M. Etheridge , A. Veber

Kingman's coalescent is a widely used process to model sample genealogies in population genetics. Recently there have been studies on the inference of quantities related to the genealogy of additional individuals given a known sample. This…

概率论 · 数学 2024-02-29 Linglong Yuan

We consider a dynamic metapopulation involving one large population of size N surrounded by colonies of size \varepsilon_NN, usually called peripheral isolates in ecology, where N\to\infty and \varepsilon_N\to 0 in such a way that…

概率论 · 数学 2013-03-15 Amaury Lambert , Chunhua Ma

Consider a population of fixed size that evolves over time. At each time, the genealogical structure of the population can be described by a coalescent tree whose branches are traced back to the most recent common ancestor of the…

概率论 · 数学 2011-12-14 Jason Schweinsberg

This paper studies the spatial coalescent on $\Z^2$. In our setting, the partition elements are located at the sites of $\Z^2$ and undergo local delayed coalescence and migration. That is, pairs of partition elements located at the same…

概率论 · 数学 2009-10-07 Andreas Greven , Vlada Limic , Anita Winter
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