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相关论文: The genetic prehistory of southern Africa

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The history of southern Africa involved interactions between indigenous hunter-gatherers and a range of populations that moved into the region. Here we use genome-wide genetic data to show that there are at least two admixture events in the…

The usefulness of a `total-evidence' approach to human population genetics was assessed through a clustering analysis of combined genome-wide SNP datasets. The combination contained only 3146 SNPs. Detailed examination of the results…

种群与进化 · 定量生物学 2012-12-07 Blaise Li

Comparisons of DNA sequences between Neandertals and present-day humans have shown that Neandertals share more genetic variants with non-Africans than with Africans. This could be due to interbreeding between Neandertals and modern humans…

种群与进化 · 定量生物学 2012-08-13 Sriram Sankararaman , Nick Patterson , Heng Li , Svante Pääbo , David Reich

Although there has been much interest in estimating divergence and admixture from genomic data, it has proven difficult to distinguish gene flow after divergence from alternative histories involving structure in the ancestral population.…

种群与进化 · 定量生物学 2013-08-01 Konrad Lohse , Laurent A. F. Frantz

The Caribbean basin is home to some of the most complex interactions in recent history among previously diverged human populations. Here, by making use of genome-wide SNP array data, we characterize ancestral components of Caribbean…

We sequenced genomes from a $\sim$7,000 year old early farmer from Stuttgart in Germany, an $\sim$8,000 year old hunter-gatherer from Luxembourg, and seven $\sim$8,000 year old hunter-gatherers from southern Sweden. We analyzed these data…

种群与进化 · 定量生物学 2015-06-18 Iosif Lazaridis , Nick Patterson , Alissa Mittnik , Gabriel Renaud , Swapan Mallick , Karola Kirsanow , Peter H. Sudmant , Joshua G. Schraiber , Sergi Castellano , Mark Lipson , Bonnie Berger , Christos Economou , Ruth Bollongino , Qiaomei Fu , Kirsten I. Bos , Susanne Nordenfelt , Heng Li , Cesare de Filippo , Kay Prüfer , Susanna Sawyer , Cosimo Posth , Wolfgang Haak , Fredrik Hallgren , Elin Fornander , Nadin Rohland , Dominique Delsate , Michael Francken , Jean-Michel Guinet , Joachim Wahl , George Ayodo , Hamza A. Babiker , Graciela Bailliet , Elena Balanovska , Oleg Balanovsky , Ramiro Barrantes , Gabriel Bedoya , Haim Ben-Ami , Judit Bene , Fouad Berrada , Claudio M. Bravi , Francesca Brisighelli , George Busby , Francesco Cali , Mikhail Churnosov , David E. C. Cole , Daniel Corach , Larissa Damba , George van Driem , Stanislav Dryomov , Jean-Michel Dugoujon , Sardana A. Fedorova , Irene Gallego Romero , Marina Gubina , Michael Hammer , Brenna Henn , Tor Hervig , Ugur Hodoglugil , Aashish R. Jha , Sena Karachanak-Yankova , Rita Khusainova , Elza Khusnutdinova , Rick Kittles , Toomas Kivisild , William Klitz , Vaidutis Kučinskas , Alena Kushniarevich , Leila Laredj , Sergey Litvinov , Theologos Loukidis , Robert W. Mahley , Béla Melegh , Ene Metspalu , Julio Molina , Joanna Mountain , Klemetti Näkkäläjärvi , Desislava Nesheva , Thomas Nyambo , Ludmila Osipova , Jüri Parik , Fedor Platonov , Olga Posukh , Valentino Romano , Francisco Rothhammer , Igor Rudan , Ruslan Ruizbakiev , Hovhannes Sahakyan , Antti Sajantila , Antonio Salas , Elena B. Starikovskaya , Ayele Tarekegn , Draga Toncheva , Shahlo Turdikulova , Ingrida Uktveryte , Olga Utevska , René Vasquez , Mercedes Villena , Mikhail Voevoda , Cheryl Winkler , Levon Yepiskoposyan , Pierre Zalloua , Tatijana Zemunik , Alan Cooper , Cristian Capelli , Mark G. Thomas , Andres Ruiz-Linares , Sarah A. Tishkoff , Lalji Singh , Kumarasamy Thangaraj , Richard Villems , David Comas , Rem Sukernik , Mait Metspalu , Matthias Meyer , Evan E. Eichler , Joachim Burger , Montgomery Slatkin , Svante Pääbo , Janet Kelso , David Reich , Johannes Krause

Whole-genome sequencing in an isolated population with few founders directly ascertains variants from the population bottleneck that may be rare elsewhere. In such populations, shared haplotypes allow imputation of variants in unsequenced…

The Roma people, living throughout Europe, are a diverse population linked by the Romani language and culture. Previous linguistic and genetic studies have suggested that the Roma migrated into Europe from South Asia about 1000-1500 years…

(ABRIDGED) We report the genome sequencing of 139 wild-derived strains of D. melanogaster, representing 22 population samples from the sub-Saharan ancestral range of this species, along with one European population. Most genomes were…

On the base of advantages in gene geography and anthropophenetics the phenogeographical method for anthropological research is initiated and experienced using dental data. Statistical and cartographical analyses are provided for 498 living…

种群与进化 · 定量生物学 2011-07-19 Vera F. Kashibadze , Olga G. Nasonova , Dmitry S. Nasonov

A range of a priori hypotheses about the evolution of modern and archaic genomes are further evaluated and tested. In addition to the well-known splits/introgressions involving Neanderthal genes into out-of- Africa people, or Denisovan…

种群与进化 · 定量生物学 2013-12-31 Peter J. Waddell

The origin and diversification of Sino-Tibetan populations have been a long-standing hot debate. However, the limited genetic information of Tibetan populations keeps this topic far from clear. In the present study, we genotyped 15 forensic…

This article shows how 3D geometric morphometric data can be analyzed using newly developed distance-based evolutionary tree inference methods, with extensions to planar graphs. Application of these methods to 3D representations of the…

种群与进化 · 定量生物学 2015-01-05 Peter J. Waddell

Recent genetic studies and whole-genome sequencing projects have greatly improved our understanding of human variation and clinically actionable genetic information. Smaller ethnic populations, however, remain underrepresented in both…

In genetically admixed populations, admixed individuals possess ancestry from multiple source groups. Studies of human genetic admixture frequently estimate ancestry components corresponding to fractions of individual genomes that trace to…

种群与进化 · 定量生物学 2022-10-25 Jazlyn A. Mooney , Lily Agranat-Tamir , Jonathan K. Pritchard , Noah A. Rosenberg

Large whole-genome sequencing projects have provided access to much of the rare variation in human populations, which is highly informative about population structure and recent demography. Here, we show how the age of rare variants can be…

种群与进化 · 定量生物学 2014-06-09 Iain Mathieson , Gil McVean

Considering the recent experimental discovery of Green et al that present day non-Africans have 1 to 4% of their nuclear DNA of Neanderthal origin, we propose here a model which is able to quantify the interbreeding events between Africans…

种群与进化 · 定量生物学 2011-06-06 Armando G. M. Neves , Maurizio Serva

Recent improvements in high-throughput genotyping and sequencing technologies have afforded the collection of massive, genome-wide datasets of DNA information from hundreds of thousands of individuals. These datasets, in turn, provide…

种群与进化 · 定量生物学 2014-12-19 Pier Francesco Palamara

Hausa language belongs to the Afroasiatic phylum, and with more first-language speakers than any other sub-Saharan African language. With a majority of its speakers residing in the Northern and Southern areas of Nigeria and the Republic of…

计算与语言 · 计算机科学 2021-02-18 Isa Inuwa-Dutse
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