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Brain network is remarkably cost-efficient while the fundamental physical and dynamical mechanisms underlying its economical optimization in network structure and activity are not clear. Here we study intricate cost-efficient interplay…

生物物理 · 物理学 2021-06-21 Junhao Liang , Sheng-Jun Wang , Changsong Zhou

Human dynamical social networks encode information and are highly adaptive. To characterize the information encoded in the fast dynamics of social interactions, here we introduce the entropy of dynamical social networks. By analysing a…

物理与社会 · 物理学 2012-01-17 Kun Zhao , Márton Karsai , Ginestra Bianconi

We present a general holistic theory for the organization of complex networks, both human-engineered and naturally-evolved. Introducing concepts of value of interactions and satisfaction as generic network performance measures, we show that…

适应与自组织系统 · 物理学 2007-07-13 Venkat Venkatasubramanian , Dimitris N. Politis , Priyan R. Patkar

With a view to connecting random mutation on the molecular level to punctuated equilibrium behavior on the phenotype level, we propose a new model for biological evolution, which incorporates random mutation and natural selection. In this…

凝聚态物理 · 物理学 2009-10-28 M. Y. Choi , H. Y. Lee , D. Kim , S. H. Park

In the brain, fine-scale correlations combine to produce macroscopic patterns of activity. However, as experiments record from larger and larger populations, we approach a fundamental bottleneck: the number of correlations one would like to…

生物物理 · 物理学 2024-02-02 Christopher W. Lynn , Qiwei Yu , Rich Pang , Stephanie E. Palmer , William Bialek

This paper mainly discusses the diffusion on complex networks with time-varying couplings. We propose a model to describe the adaptive diffusion process of local topological and dynamical information, and find that the Barabasi-Albert…

物理与社会 · 物理学 2018-12-11 Ruiwu Niu , Xiaoqun Wu , Ju-an Lu , Jinhu Lv

Discriminating between correct and incorrect substrates is a core process in biology but how is energy apportioned between the conflicting demands of accuracy ($\mu$), speed ($\sigma$) and total entropy production rate ($P$)? Previous…

分子网络 · 定量生物学 2019-06-18 Felix Wong , Ariel Amir , Jeremy Gunawardena

Recent advances in experimental techniques enable the simultaneous recording of activity from thousands of neurons in the brain, presenting both an opportunity and a challenge: to build meaningful, scalable models of large neural…

生物物理 · 物理学 2025-08-05 Luca Di Carlo , Francesca Mignacco , Christopher W. Lynn , William Bialek

Two cellular automata models with directed mass flow and internal time scales are studied by numerical simulations. Relaxation rules are a combination of probabilistic critical height (probability of toppling $p$) and deterministic critical…

统计力学 · 物理学 2009-10-31 Bosiljka Tadic

When a simple excitable system is continuously stimulated by a Poissonian external source, the response function (mean activity versus stimulus rate) generally shows a linear saturating shape. This is experimentally verified in some classes…

神经元与认知 · 定量生物学 2007-05-23 Mauro Copelli , Paulo R. A. Campos

The maximum entropy ansatz, as it is often invoked in the context of time-series analysis, suggests the selection of a power spectrum which is consistent with autocorrelation data and corresponds to a random process least predictable from…

概率论 · 数学 2008-07-19 Tryphon T. Georgiou

We address the interaction-time optimization for frequency estimation in a two-level system. The goal is to estimate with maximum precision a stochastic perturbation. Our approach is valid for any figure of merit used to define optimality,…

介观与纳米尺度物理 · 物理学 2021-02-17 Angel Gutierrez-Rubio , Peter Stano , Daniel Loss

Power-law-shaped avalanche-size distributions are widely used to probe for critical behavior in many different systems, particularly in neural networks. The definition of avalanche is ambiguous. Usually, theoretical avalanches are defined…

生物物理 · 物理学 2018-05-22 Mauricio Girardi-Schappo , Marcelo H. R. Tragtenberg

A path information is defined in connection with different possible paths of irregular dynamic systems moving in its phase space between two points. On the basis of the assumption that the paths are physically differentiated by their…

统计力学 · 物理学 2007-05-23 Qiuping A. Wang

We study several probability distributions relevant to the avalanche dynamics of elastic interfaces driven on a random substrate: The distribution of size, duration, lateral extension or area, as well as velocities. Results from the…

无序系统与神经网络 · 物理学 2019-10-18 Alejandro B. Kolton , Pierre Le Doussal , Kay Joerg Wiese

Using probabilistic approach, the transient dynamics of sparsely connected Hopfield neural networks is studied for arbitrary degree distributions. A recursive scheme is developed to determine the time evolution of overlap parameters. As…

无序系统与神经网络 · 物理学 2011-11-09 Pan Zhang , Yong Chen

The entropy of network ensembles characterizes the amount of information encoded in the network structure, and can be used to quantify network complexity, and the relevance of given structural properties observed in real network datasets…

无序系统与神经网络 · 物理学 2014-06-18 Kartik Anand , Dimitri Krioukov , Ginestra Bianconi

Scale-free behavior as well as oscillations are frequently observed in the activity of many natural systems. One important example is the cortical tissues of mammalian brain where both phenomena are simultaneously observed. Rhythmic…

无序系统与神经网络 · 物理学 2018-08-29 S. Amin Moosavi , Afshin Montakhab , Alireza Valizadeh

We study a neural network model of interacting stochastic discrete two--state cellular automata on a regular lattice. The system is externally tuned to a critical point which varies with the degree of stochasticity (or the effective…

统计力学 · 物理学 2015-06-12 Kaustubh Manchanda , Avinash Chand Yadav , Ramakrishna Ramaswamy

Sampling considerations limit the experimental conditions under which information theoretic analyses of neurophysiological data yield reliable results. We develop a procedure for computing the full temporal entropy and information of…

生物物理 · 物理学 2009-11-06 Simon R. Schultz , Stefano Panzeri