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相关论文: Rate of Adaptation in Large Sexual Populations

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In large populations, multiple beneficial mutations may be simultaneously spreading. In asexual populations, these mutations must either arise on the same background or compete against each other. In sexual populations, recombination can…

种群与进化 · 定量生物学 2013-12-19 D. B. Weissman , O. Hallatschek

We consider the accumulation of beneficial and deleterious mutations in large asexual populations. The rate of adaptation is affected by the total mutation rate, proportion of beneficial mutations and population size $N$. We show that…

概率论 · 数学 2010-10-18 Feng Yu , Alison Etheridge , Charles Cuthbertson

In large asexual populations, beneficial mutations have to compete with each other for fixation. Here, I derive explicit analytic expressions for the rate of substitution and the mean beneficial effect of fixed mutations, under the…

种群与进化 · 定量生物学 2007-05-23 Claus O. Wilke

We consider a model of asexually reproducing individuals with random mutations and selection. The rate of mutations is proportional to the population size, $N$. The mutations may be either beneficial or deleterious. In a paper by Yu,…

概率论 · 数学 2015-08-20 Michael Kelly

We study the evolution of large but finite asexual populations evolving in fitness landscapes in which all mutations are either neutral or strongly deleterious. We demonstrate that despite the absence of higher fitness genotypes, adaptation…

生物物理 · 物理学 2007-05-23 Claus O. Wilke

We consider an asexual biological population of constant size $N$ evolving in discrete time under the influence of selection and mutation. Beneficial mutations appear at rate $U$ and their selective effects $s$ are drawn from a distribution…

种群与进化 · 定量生物学 2015-05-14 Su-Chan Park , Damien Simon , Joachim Krug

When mutation rates are low, natural selection remains effective, and increasing the mutation rate can give rise to an increase in adaptation rate. When mutation rates are high to begin with, however, increasing the mutation rate may have a…

种群与进化 · 定量生物学 2012-11-06 Philip Gerrish , Alexandre Colato , Paul Sniegowski

When beneficial mutations are rare, they accumulate by a series of selective sweeps. But when they are common, many beneficial mutations will occur before any can fix, so there will be many different mutant lineages in the population…

种群与进化 · 定量生物学 2007-05-23 Michael M. Desai , Daniel S. Fisher

The adaptation of large asexual populations is hampered by the competition between independently arising beneficial mutations in different individuals, which is known as clonal interference. Fisher and Muller proposed that recombination…

种群与进化 · 定量生物学 2013-08-16 Su-Chan Park , Joachim Krug

It has been a puzzling question why some organisms reproduce sexually. Fisher and Muller hypothesized that reproducing by sex can speed up the evolution. They explained that in the sexual reproduction, recombination can combine beneficial…

概率论 · 数学 2021-04-19 Nantawat Udomchatpitak

In large asexual populations, multiple beneficial mutations arise in the population, compete, interfere with each other, and accumulate on the same genome, before any of them fix. The resulting dynamics, although studied by many authors, is…

种群与进化 · 定量生物学 2015-06-11 Daniel S. Fisher

Linked beneficial and deleterious mutations are known to decrease the fixation probability of a favorable mutation in large asexual populations. While the hindering effect of strongly deleterious mutations on adaptive evolution has been…

种群与进化 · 定量生物学 2022-03-22 Kavita Jain

The adaptive evolution of large asexual populations is generally characterized by competition between clones carrying different beneficial mutations. This interference phenomenon slows down the adaptation speed and makes the theoretical…

种群与进化 · 定量生物学 2012-12-20 Maria Rita Fumagalli , Matteo Osella , Philippe Thomen , Francois Heslot , Marco Cosentino Lagomarsino

Two important problems affect the ability of asexual populations to accumulate beneficial mutations, and hence to adapt. First, clonal interference causes some beneficial mutations to be outcompeted by more-fit mutations which occur in the…

种群与进化 · 定量生物学 2008-04-08 Craig A. Fogle , James L. Nagle , Michael M. Desai

We consider a model of asexually reproducing individuals. The birth and death rates of the individuals are affected by a fitness parameter. The rate of mutations that cause the fitnesses to change is proportional to the population size, N.…

概率论 · 数学 2013-07-24 Michael Kelly

How fast does a population evolve from one fitness peak to another? We study the dynamics of evolving, asexually reproducing populations in which a certain number of mutations jointly confer a fitness advantage. We consider the time until a…

种群与进化 · 定量生物学 2010-03-31 Chaitanya S. Gokhale , Yoh Iwasa , Martin A. Nowak , Arne Traulsen

We consider an asexual population under strong selection-weak mutation conditions evolving on rugged fitness landscapes with many local fitness peaks. Unlike the previous studies in which the initial fitness of the population is assumed to…

种群与进化 · 定量生物学 2011-11-18 Kavita Jain , Sarada Seetharaman

Large populations may contain numerous simultaneously segregating polymorphisms subject to natural selection. Since selection acts on individuals whose fitness depends on many loci, different loci affect each other's dynamics. This leads to…

种群与进化 · 定量生物学 2011-08-09 Richard A. Neher , Boris I. Shraiman

A major aim of evolutionary biology is to explain the respective roles of adaptive versus non-adaptive changes in the evolution of complexity. While selection is certainly responsible for the spread and maintenance of complex phenotypes,…

种群与进化 · 定量生物学 2017-01-17 Thomas LaBar , Christoph Adami

The prevalence of sexual reproduction ("sex") in eukaryotes is an enigma of evolutionary biology. Sex increases genetic variation only tells its long-term superiority in essence. The accumulation of harmful mutations causes an immediate and…

种群与进化 · 定量生物学 2013-08-01 Xiang-Ping Jia , Hong Sun
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