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相关论文: Fixation of a Deleterious Allele under Mutation Pr…

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A mutator is an allele that increases the mutation rate throughout the genome by disrupting some aspect of DNA replication or repair. Mutators that increase the mutation rate by the order of 100 fold have been observed to spontaneously…

种群与进化 · 定量生物学 2008-12-31 C. Scott Wylie , Cheol-Min Ghim , David A. Kessler , Herbert Levine

A fundamental problem in the fields of population genetics, evolution, and community ecology, is the fate of a single mutant, or invader, introduced in a finite population of wild types. For a fixed-size community of $N$ individuals, with…

种群与进化 · 定量生物学 2017-10-25 Matan Danino , Nadav M. Shnerb

Temporal environmental variations are ubiquitous in nature, yet most of the theoretical works in population genetics and evolution assume fixed environment. Here we analyze the effect of variations in carrying capacity on the fate of a…

种群与进化 · 定量生物学 2019-12-16 Immanuel Meyer , Nadav M. Shnerb

For a beneficial allele which enters a large unstructured population and eventually goes to fixation, it is known that the time to fixation is approximately $2\log(\alpha)/\alpha$ for a large selection coefficient $\alpha$. For a population…

Gene duplications are one of major primary driving forces for evolutionary novelty. We took population genetics models of genes duplicate to study how evolutionary forces acting during the fixation of mutant allele at duplicate loci. We…

种群与进化 · 定量生物学 2012-03-19 Yupeng Cun

We study the fixation and stationary behavior of the Lambda-Wright-Fisher process with parent-independent mutation and finitely many types, a jump-diffusion model for allele frequency dynamics in large populations with potentially large…

We investigate the process of fixation of advantageous mutations in an asexual population. We assume that the effect of each beneficial mutation is exponentially distributed with mean value $\omega_{med}=1/\beta$. The model also considers…

种群与进化 · 定量生物学 2009-11-10 Viviane M. de Oliveira , Paulo R. A. Campos

In evolutionary game dynamics, reproductive success increases with the performance in an evolutionary game. If strategy $A$ performs better than strategy $B$, strategy $A$ will spread in the population. Under stochastic dynamics, a single…

种群与进化 · 定量生物学 2009-03-06 Philipp M. Altrock , Arne Traulsen

We study the evolutionary dynamics of an asexual population of nonmutators and mutators on a class of epistatic fitness landscapes. We consider the situation in which all mutations are deleterious and mutators are produced from nonmutators…

种群与进化 · 定量生物学 2013-05-08 Kavita Jain , Apoorva Nagar

The environment in which a population evolves can have a crucial impact on selection. We study evolutionary dynamics in finite populations of fixed size in a changing environment. The population dynamics are driven by birth and death…

种群与进化 · 定量生物学 2014-09-01 Peter Ashcroft , Philipp M Altrock , Tobias Galla

We model and study the genetic evolution and conservation of a population of diploid hermaphroditic organisms, evolving continuously in time and subject to resource competition. In the absence of mutations, the population follows a 3-type…

概率论 · 数学 2012-07-23 Camille Coron

Linked beneficial and deleterious mutations are known to decrease the fixation probability of a favorable mutation in large asexual populations. While the hindering effect of strongly deleterious mutations on adaptive evolution has been…

种群与进化 · 定量生物学 2022-03-22 Kavita Jain

Stochastic discrete-time SIS and SIR models of endemic diseases are introduced and analyzed. For the deterministic, mean-field model, the basic reproductive number $R_0$ determines their global dynamics. If $R_0\le 1$, then the frequency of…

种群与进化 · 定量生物学 2020-05-19 Sebastian J. Schreiber , Shuo Huang , Jifa Jiang , Hao Wang

We study the competition between several advantageous mutants in an asexual population (clonal interference) as a function of the time between the appearance of the mutants, their selective advantages, and the rate of deleterious mutations.…

生物物理 · 物理学 2007-05-23 Paulo R. A. Campos , Christoph Adami , Claus O. Wilke

Although mutations drive the evolutionary process, the rates at which the mutations occur are themselves subject to evolutionary forces. Our purpose here is to understand the role of selection and random genetic drift in the evolution of…

种群与进化 · 定量生物学 2016-10-27 Ananthu James , Kavita Jain

Convergence of discrete-time Markov chains with two timescales is a powerful tool to study stochastic evolutionary games in subdivided populations. Focusing on linear games within demes, convergence to a diffusion process for the strategy…

种群与进化 · 定量生物学 2024-11-05 Sabin Lessard

The Wright-Fisher model and the Moran model are both widely used in population genetics. They describe the time evolution of the frequency of an allele in a well-mixed population with fixed size. We propose a simple and tractable model…

种群与进化 · 定量生物学 2024-12-30 Arthur Alexandre , Alia Abbara , Cecilia Fruet , Claude Loverdo , Anne-Florence Bitbol

We study fixation probabilities and times as a consequence of neutral genetic drift in subdivided populations, motivated by a model of the cultural evolutionary process of language change that is described by the same mathematics as the…

种群与进化 · 定量生物学 2015-05-26 R A Blythe

This work is a systematic study of discrete Markov chains that are used to describe the evolution of a two-types population. Motivated by results valid for the well-known Moran (M) and Wright-Fisher (WF) processes, we define a general class…

种群与进化 · 定量生物学 2017-05-02 Fabio A. C. C. Chalub , Max O. Souza

We present a version of the classical Moran model, in which mutations are taken into account; the possibility of mutations was introduced by Moran in his seminal paper, but it is more often overlooked in discussing the Moran model. For this…

种群与进化 · 定量生物学 2024-08-07 Giuseppe Gaeta
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