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A theoretical analysis of the effect of force and torque on spontaneously twisted, fluctuating elastic ribbons is presented. We find that when a filament with a straight center line and a spontaneously twisted noncircular cross section is…

软凝聚态物质 · 物理学 2007-05-23 S. Panyukov , Y. Rabin

Biological filaments such as DNA or bacterial flagella are typically curved in their natural states. To elucidate the interplay of viscous drag, twisting, and bending in the overdamped dynamics of such filaments, we compute the steady-state…

软凝聚态物质 · 物理学 2009-10-31 Stephan A. Koehler , Thomas R. Powers

The structure of DNA in the nucleosome core particle is studied using an elastic model that incorporates anisotropy in the bending energetics and twist-bend coupling. Using the experimentally determined structure of nucleosomal DNA [T.J.…

生物大分子 · 定量生物学 2009-11-13 Farshid Mohammad-Rafiee , Ramin Golestanian

Twisted assemblies of filaments in ropes, cables and bundles are essential structural elements in wide use in macroscopic materials as well as within the cells and tissues of living organisms. We develop the unique, non-linear elastic…

软凝聚态物质 · 物理学 2015-05-18 Gregory M. Grason

The strength of the spin-orbit interaction relevant to transport in a low dimensional structure depends critically on the relative geometrical arrangement of current carrying orbitals. Recent tight-binding orbital models for spin transport…

介观与纳米尺度物理 · 物理学 2017-10-20 Solmar Varela , Vladimiro Mujica , Ernesto Medina

We investigate non-linear elastic deformations in the phase field crystal model and derived amplitude equations formulations. Two sources of non-linearity are found, one of them based on geometric non-linearity expressed through a finite…

材料科学 · 物理学 2016-06-15 C. Hüter , M. Friák , M. Weikamp , J. Neugebauer , N. Goldenfeld , B. Svendsen , R. Spatschek

Friction and wear of metals are critically influenced by the microstructures of the bodies constituting the tribological contact. Understanding the microstructural evolution taking place over the lifetime of a tribological system therefore…

Motivated by diverse phenomena in cellular biophysics, including bacterial flagellar motion and DNA transcription and replication, we study the overdamped nonlinear dynamics of a rotationally forced filament with twist and bend elasticity.…

软凝聚态物质 · 物理学 2009-10-31 Charles W. Wolgemuth , Thomas R. Powers , Raymond E. Goldstein

We investigate the sliding strength of thin filaments in frictional contact with a translating cylinder, perpendicular to the filaments' axes, in knotted (clove hitch) and unknotted (capstan) configurations. Recent work reported superlinear…

软凝聚态物质 · 物理学 2026-04-09 Javier Sabater , Ji-Sung Park , Jérôme Crassous , Sébastien Neukirch , Pedro M. Reis

The occurrence of coiled or helical morphologies is common in nature, from plant roots to DNA packaging into viral capsids, as well as in applications such as oil drilling processes. In many examples, chiral structures result from the…

Snapping of a slender structure is utilized in a wide range of natural and man-made systems, mostly to achieve rapid movement without relying on muscle-like elements. Although several mechanisms for elastic energy storage and rapid release…

软凝聚态物质 · 物理学 2019-03-27 Tomohiko G. Sano , Hirofumi Wada

Several experiments have demonstrated the existence of an electro-mechanical effect in many biological tissues and hydrogels, and its actual influence on growth, migration, and pattern formation. Here, to model these interactions and…

软凝聚态物质 · 物理学 2020-07-07 Yangkun Du , Yipin Su , Chaofeng Lu , Weiqiu Chen , Michel Destrade

Topological defects are crucial to the thermodynamics and structure of condensed matter systems. For instance, when incorporated into crystalline membranes like graphene, disclinations with positive and negative topological charge…

软凝聚态物质 · 物理学 2018-08-29 Isaac R. Bruss , Gregory M. Grason

The assembly of filamentous bundles with controlled diameters is common in biological systems and desirable for the development of nanomaterials. We discuss dynamical simulations and free energy calculations on patchy spheres with chiral…

软凝聚态物质 · 物理学 2015-05-18 Yasheng Yang , Robert B. Meyer , Michael F. Hagan

Networks of filamentous proteins play a crucial role in cell mechanics. These cytoskeletal networks, together with various crosslinking and other associated proteins largely determine the (visco)elastic response of cells. In this letter we…

无序系统与神经网络 · 物理学 2009-11-10 D. A. Head , A. J. Levine , F. C. MacKintosh

Exploiting the "natural" frame of space curves, we formulate an intrinsic dynamics of twisted elastic filaments in viscous fluids. A pair of coupled nonlinear equations describing the temporal evolution of the filament's complex curvature…

软凝聚态物质 · 物理学 2009-10-31 Raymond E. Goldstein , Thomas R. Powers , Chris H. Wiggins

We develop the theory of the coupling between in-plane order and out-of-plane geometry in twisted, two-dimensionally ordered filament bundles based on the non-linear continuum elasticity theory of columnar materials. We show that twisted…

软凝聚态物质 · 物理学 2015-06-03 Gregory M. Grason

We study the over-damped dynamics of individual one-dimensional elastic filaments subjected to a chiral active force which propels each point of the filament at a fixed angle relative to the tangent vector of the filament at that point.…

软凝聚态物质 · 物理学 2026-03-09 Chanania Steinbock , Daniel A. Beller

The symmetries of the DNA double helix require a new term in its linear response to stress: the coupling between twist and stretch. Recent experiments with torsionally-constrained single molecules give the first direct measurement of this…

软凝聚态物质 · 物理学 2008-02-03 C. S. O'Hern , Randall D. Kamien , T. C. Lubensky , Philip Nelson

A generalized theory of the self-limiting assembly of twisted bundles of filaments and columns is presented. Bundles and fibers form in a broad variety of supramolecular systems, from biological to synthetic materials. A widely-invoked…

软凝聚态物质 · 物理学 2023-08-08 Gregory M. Grason
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