中文

正则对偶理论应用于Lennard-Jones势极小化问题

最优化与控制 2012-12-12 v2 生物物理 生物大分子

摘要

简化的Lennard-Jones(LJ)势极小化问题为 f(x)=4i=1Nj=1,j<iN(1τij61τij3)f(x)=4\sum_{i=1}^N \sum_{j=1,j<i}^N (\frac{1}{\tau_{ij}^6} -\frac{1}{\tau_{ij}^3}),约束条件为 xRnx\in \mathbb{R}^n,其中 τij=(x3i2x3j2)2+(x3i1x3j1)2+(x3ix3j)2\tau_{ij}=(x_{3i-2}-x_{3j-2})^2 +(x_{3i-1}-x_{3j-1})^2 +(x_{3i} -x_{3j})^2(x3i2,x3i1,x3i)(x_{3i-2},x_{3i-1},x_{3i}) 是原子 iiR3\mathbb{R}^3 中的坐标,i,j=1,2,...,N(2整数)i,j=1,2,...,N(\geq 2 \quad \text{整数})n=3Nn=3NNN 是原子总数。目标函数的非凸性以及随 NN 呈指数增长的巨量局部极小点,引起了许多数学优化专家的兴趣。本文利用正则对偶理论,在淀粉样纤维分子模型构建的启发下,巧妙地处理了这一问题。

关键词

引用

@article{arxiv.1107.5146,
  title  = {Canonical dual theory applied to a Lennard-Jones potential minimization problem},
  author = {Jiapu Zhang},
  journal= {arXiv preprint arXiv:1107.5146},
  year   = {2012}
}

备注

Please cite this paper as a book-chapter: "Jiapu Zhang (2011), Canonical dual theory applied to a Lennard-Jones potential minimization problem, in Book [Jiapu Zhang, Practical Global Optimization Computing Methods in Molecular Modelling - for Atomic-resolution Structures of Amyloid Fibrils, ISBN 978-3-8465-2139-7, LAP Academic Publisher, 2011], Chapter 5, pages 94-114