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This article gives a brief introduction to the mathematical modeling of large-scale biological evolution and extinction. We give three examples of simple models in this field: the coevolutionary avalanche model of Bak and Sneppen, the…

adap-org · 物理学 2007-05-23 M. E. J. Newman

This paper is devoted to the study of the persistence versus extinction of species in the reaction-diffusion equation: \begin{equation} u_t-\Delta u=f(t,x_1-ct,y,u) \quad\quad t>0,\ x\in\Omega,\nonumber \end{equation} where $\Omega$ is of…

偏微分方程分析 · 数学 2015-09-24 Hoang-Hung Vo

We study a model of a multi-species ecosystem described by Lotka-Volterra-like equations. Interactions among species form a network whose evolution is determined by the dynamics of the model. Numerical simulations show power-law…

种群与进化 · 定量生物学 2007-05-23 Francois Coppex , Michel Droz , Adam Lipowski

We study the stochastic evolution of four species in cyclic competition in a well mixed environment. In systems composed of a finite number $N$ of particles these simple interaction rules result in a rich variety of extinction scenarios,…

统计力学 · 物理学 2012-07-09 C. H. Durney , S. O. Case , M. Pleimling , R. K. P. Zia

Introducing the effect of extinction into the so-called replicator equations in mathematical biology, we construct a general model of ecosystems. The present model shows mass extinction by its own extinction dynamics when the system…

adap-org · 物理学 2008-02-03 Kei Tokita , Ayumu Yasutomi

Using data drawn from large-scale databases, a number of interesting trends in the fossil record have been observed in recent years. These include the average decline in extinction rates throughout the Phanerozoic, the average increase in…

adap-org · 物理学 2007-05-23 M. E. J. Newman , Paolo Sibani

We consider a continuum version of a previously introduced and numerically studied model of macroevolution (PRL 75, 2055, (1995)) in which agents evolve by an optimization process in a rugged fitness landscape and die due to their…

生物物理 · 物理学 2009-10-30 Paolo Sibani

We study a model of growing population that competes for resources. At each time step, all existing particles reproduce and the offspring randomly move to neighboring sites. Then at any site with more than one offspring, the particles are…

概率论 · 数学 2015-10-26 Idan Perl , Arnab Sen , Ariel Yadin

A class of models for large-scale evolution and mass extinctions is presented. These models incorporate environmental changes on all scales, from influences on a single species to global effects. This is a step towards a unified picture of…

adap-org · 物理学 2007-05-23 C. Wilke , S. Altmeyer , T. Martinetz

We present an explicit unified stochastic model of fluctuations in population size due to random birth, death, density-dependent competition and environmental fluctuations. Stochastic dynamics provide insight into small populations,…

种群与进化 · 定量生物学 2008-07-31 Alexei J. Drummond , Peter D. Drummond

We propose and study {a generalized Beverton-Holt competition model} subject to Allee effects to obtain insights on how the interplay of Allee effects and contest competition affects the persistence and the extinction of two competing…

动力系统 · 数学 2015-05-25 Yun Kang

This article is concerned with a version of the contact process with sexual reproduction on a graph with two levels of interactions modeling metapopulations. The population is spatially distributed into patches and offspring are produced in…

概率论 · 数学 2015-04-08 Eric Foxall , Nicolas Lanchier

This article partakes of the PEGASE project the goal of which is a better understanding of the mechanisms explaining the behaviour of species living in a network of forest patches linked by ecological corridors (hedges for instance).…

概率论 · 数学 2021-09-15 Gauthier Delvoye , Olivier Goubet , Frédéric Paccaut

We develop a mathematical model of extinction and coexistence in a generic predator-prey ecosystem composed of two herbivores in asymmetrical competition and a hunter exerting a predatory pressure on both species. With the aim of…

适应与自组织系统 · 物理学 2017-08-28 Marcelo N Kuperman , Fabiana Laguna , Guillermo Abramson , Adrian Monjeau. Jose Luis Lanata

We analyze purely competitive many-species Lotka-Volterra systems with random interaction matrices, focusing the attention on statistical properties of their asymptotic states. Generic features of the evolution are outlined from a…

adap-org · 物理学 2009-10-30 Guillermo Abramson , Damian Zanette

A randomly interacting N-species Lotka-Volterra system in the presence of a Gaussian multiplicative noise is analyzed. The investigation is focused on the role of this external noise into the statistical properties of the extinction times…

统计力学 · 物理学 2008-10-07 Alessandro Fiasconaro , Bernardo Spagnolo

We consider a moving boundary mathematical model of biological invasion. The model describes the spatiotemporal evolution of two adjacent populations: each population undergoes linear diffusion and logistic growth, and the boundary between…

种群与进化 · 定量生物学 2023-09-06 Matthew J Simpson , Nizhum Rahman , Scott W McCue , Alexander KY Tam

We investigate the formation of stable ecological networks where many species share the same resource. We show that such stable ecosystem naturally occurs as a result of extinctions. We obtain an analytical relation for the number of…

种群与进化 · 定量生物学 2017-04-05 V. Kozlov , S. Vakulenko , U. Wennergren

Here we present extinction, extirpation and coexistence conditions where / when two communities combine. We consider one specific model where two communities coalesce, and another model where the communities coexist side by side, blending…

种群与进化 · 定量生物学 2025-01-14 Martin Heidelman , Dervis Can Vural

This paper deals with an impulsive degenerate logistic model, where pulses are introduced for modeling interventions or disturbances, and degenerate logistic term may describe refugees or protections zones for the species. Firstly, the…

种群与进化 · 定量生物学 2024-02-20 Willian Cintra , Zhigui Lin , Carlos Alberto Santos , Phyu Phyu Win