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相关论文: Polymer Release out of a Spherical Vesicle through…

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We analyze the free energy for translocation of a polymer from the outside of a spherical vesicle to the inside. The process is assumed to be driven by the adsorption of the polymer on the inner surface of the vesicle. We argue that in the…

软凝聚态物质 · 物理学 2009-10-31 K. Kiran Kumar , K. L. Sebastian

We study the translocation process of a polymer in the absence of external fields for various pore diameters $b$ and membrane thickness $L$. The polymer performs Rouse and reptation dynamics. The mean translocation time $<\tau_t>$ that the…

软凝聚态物质 · 物理学 2007-05-23 Joanne Klein Wolterink , Gerard T. Barkema , Debabrata Panja

We examine the ejection of an initially strongly confined flexible polymer from a spherical capsid through a nanoscale pore. We use molecular dynamics for unprecedentedly high initial monomer densities. We show that the time for an…

生物物理 · 物理学 2016-01-06 J. Piili , R. P. Linna

The translocation of a polymer through a pore in a membrane separating fluids of different viscosities is studied via several computational approaches. Starting with the polymer halfway, we find that as a viscosity difference across the…

软凝聚态物质 · 物理学 2013-04-17 Hendrick W. de Haan , Gary W. Slater

We study the passage (translocation) of a self-avoiding polymer through a membrane pore in two dimensions. In particular, we numerically measure the probability distribution Q(T) of the translocation time T, and the distribution P(s,t) of…

统计力学 · 物理学 2009-02-12 Clément Chatelain , Yacov Kantor , Mehran Kardar

Polymer ejection from nano-confinement has been of interest due to its relation to various fundamental sciences and applications. However, the ejection dynamics of a polymer with different persistence lengths from confinement through a…

软凝聚态物质 · 物理学 2023-06-13 Farzaneh Moazemi , Samaneh Ghanbari-Kashan , Narges Nikoofard

Velocity relaxation of a spherically symmetric polymer, immersed in a viscous incompressible fluid, and after a sudden small impulse or a sudden twist from a state of rest, is studied on the basis of the linearized Navier-Stokes equations…

流体动力学 · 物理学 2015-06-17 B. U. Felderhof

We study the translocation of a flexible polymer through a pore in a membrane induced by its adsorption on \trans side of the membrane. When temperature $T$ is higher than $T_c$, the adsorption-desorption transition temperature, attractive…

软凝聚态物质 · 物理学 2009-10-31 Pyeong Jun Park , Wokyung Sung

We use a mesoscale simulation approach to explore the impact of different capsid geometries on the packaging and ejection dynamics of polymers of different flexibility. We find that both packing and ejection times are faster for flexible…

软凝聚态物质 · 物理学 2009-11-11 I. Ali , D. Marenduzzo , J. M. Yeomans

Monte Carlo simulations are used to study the translocation of a polymer into and out of a ellipsoidal cavity through a narrow pore. We measure the polymer free energy F as a function of a translocation coordinate, s, defined to be the…

软凝聚态物质 · 物理学 2015-05-20 James M. Polson

We investigate the problem of polymer translocation through a nanopore in the absence of an external driving force. To this end, we use the two-dimensional (2D) fluctuating bond model with single-segment Monte Carlo moves. To overcome the…

计算物理 · 物理学 2012-12-06 Kaifu Luo , Tapio Ala-Nissila , See-chen Ying

Behavior of a dilute polymer solution in a random three-dimensional flow with an average shear is studied experimentally. Polymer contribution to the shear stress is found to be more than two orders of magnitude higher than in a laminar…

混沌动力学 · 物理学 2009-10-31 Alexander Groisman , Victor Steinberg

We study the passage times of a translocating polymer of length $N$ in three dimensions, while it is pulled through a narrow pore with a constant force $F$ applied to one end of the polymer. At small to moderate forces, satisfying the…

软凝聚态物质 · 物理学 2008-02-14 Debabrata Panja , Gerard T. Barkema

We construct a new statistical physical model of polymer translocation through a pore in a membrane treated as the diffusion process across a free energy barrier. We determine the translocation time in terms of chain flexibility yielding an…

软凝聚态物质 · 物理学 2015-06-25 W. Sung , P. J. Park

Polymer translocation in three dimensions out of planar confinements is studied in this paper. Three membranes are located at $z=-h$, $z=0$ and $z=h_1$. These membranes are impenetrable, except for the middle one at $z=0$, which has a…

软凝聚态物质 · 物理学 2008-01-29 Debabrata Panja , Gerard T. Barkema , Robin C. Ball

Most of the theoretical models describing the translocation of a polymer chain through a nanopore use the hypothesis that the polymer is always relaxed during the complete process. In other words, models generally assume that the…

生物大分子 · 定量生物学 2009-11-13 Michel G. Gauthier , Gary W. Slater

The transport of biomolecules across a cell membrane is an important phenomena that plays a pivotal role in the functioning of biological cells. In this paper, we investigate such processes by modeling the translocation of polymers through…

软凝聚态物质 · 物理学 2022-11-01 Andri Sharma

Langevin dynamics simulations are performed to investigate ejection dynamics of spherically confined flexible polymers through a pore. By varying the chain length $N$ and the initial volume fraction $\phi_0$ of the monomers, two scaling…

软凝聚态物质 · 物理学 2020-01-29 Hao-Chun Huang , Pai-Yi Hsiao

We study the diffusion of a linear polymer in the presence of permeable membranes without excluded volume interactions, using scaling theory and Monte Carlo simulations. We find that the average time it takes for a chain with polymerization…

凝聚态物理 · 物理学 2016-08-31 Hyoungsoo Yoon , J. M. Deutsch

The phase behaviour of a single large semiflexible polymer immersed in a suspension of spherical particles is studied. All interactions are simple excluded volume interactions and the diameter of the spherical particles is an order of…

软凝聚态物质 · 物理学 2009-10-30 Richard P. Sear
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