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In this article, we consider a configuration of weighted random balls in $\mathbb{R}^d$ generated according to a Poisson point process. The model investigated exhibits inhomogeneity, as well as dependence between the centers and the radii…

概率论 · 数学 2014-06-04 Renan Gobard

We study the conformational properties of heteropolymers containing two types of monomers A and B, modeled as self-avoiding random walks on a regular lattice. Such a model can describe in particular the sequences of hydrophobic and…

无序系统与神经网络 · 物理学 2014-09-01 Viktoria Blavatska , Wolfhard Janke

. We consider three dimensional model of the Gaussian polymer chain in the presence of defects to understand the formation of a polymer aggregate where the aggregate is induced by the defects. The defects are acting as an attractive centres…

软凝聚态物质 · 物理学 2021-09-29 Pramod Kumar Mishra

We investigate the complexation of a highly charged sphere with a long flexible polyelectrolyte, \textit{both negatively charged} in salt free environment. Electroneutrality is insured by the presence of divalent counterions. Using…

软凝聚态物质 · 物理学 2007-05-23 Rene Messina , Christian Holm , Kurt Kremer

The structure and thermodynamic state of a system changes under the influence of external electric fields. Neutral systems are characterized by their dielectric constant epsilon, while charged ones also by their charge distribution. In this…

软凝聚态物质 · 物理学 2009-12-10 Yoav Tsori

We numerically produce fully amorphous assemblies of frictionless spheres in three dimensions and study the jamming transition these packings undergo at large volume fractions. We specify four protocols yielding a critical value for the…

统计力学 · 物理学 2010-05-07 Pinaki Chaudhuri , Ludovic Berthier , Srikanth Sastry

While the dynamics of a fully flexible polymer ejecting a capsid through a nanopore has been extensively studied, the ejection dynamics of semiflexible polymers has not been properly characterized. Here we report results from simulations of…

生物物理 · 物理学 2017-11-08 Riku P. Linna , Pauli M. Suhonen , Joonas Piili

A directed polymer is allowed to branch, with configurations determined by global energy optimization and disorder. A finite size scaling analysis in 2D shows that, if disorder makes branching more and more favorable, a critical transition…

统计力学 · 物理学 2016-08-31 Giovanni Sartoni , Attilio L. Stella

Active processes in living systems generate nonequilibrium forces that deform embedded passive macromolecules. To understand how such dynamics influence polymer conformation, we study a flexible passive chain in an active nematic fluid.…

软凝聚态物质 · 物理学 2025-09-30 Zahra K. Valei , Davide Marenduzzo , Tyler N. Shendruk

We study the passage (translocation) of a self-avoiding polymer through a membrane pore in two dimensions. In particular, we numerically measure the probability distribution Q(T) of the translocation time T, and the distribution P(s,t) of…

统计力学 · 物理学 2009-02-12 Clément Chatelain , Yacov Kantor , Mehran Kardar

Particles in pressure-driven channel flow are often inhomogeneously distributed. Two modes of low-Reynolds number instability, absent in Poiseuille flow of clean fluid, are created by inhomogeneous particle loading, and their mechanism is…

流体动力学 · 物理学 2024-11-27 Anup Kumar , Rama Govindarajan

Motivated by the problem of domain formation in chromosomes, we studied a co--polymer model where only a subset of the monomers feel attractive interactions. These monomers are displaced randomly from a regularly-spaced pattern, thus…

生物大分子 · 定量生物学 2018-02-13 Matteo Negri , Marco Gherardi , Guido Tiana , Marco Cosentino Lagomarsino

We investigate solid-solid and solid-liquid transitions of elastic flexible off-lattice polymers with Lennard-Jones monomer-monomer interaction and anharmonic springs by means of sophisticated variants of multicanonical Monte Carlo methods.…

软凝聚态物质 · 物理学 2010-07-23 Stefan Schnabel , Michael Bachmann , Wolfhard Janke

Monte Carlo simulations are used to study the non-uniform equilibrium charge distribution along a single annealed polyelectrolyte chain under theta-solvent conditions and with added salt. Within a range of the order of the Debye length…

软凝聚态物质 · 物理学 2009-11-07 Tiziano Zito , Christian Seidel

We consider a polymer brush grafted to a surface (acting as an electrode) and bearing a charged group at its free end. Using a second distant electrode, the brush is subject to a constant electric field. Based on a coarse-grained continuum…

软凝聚态物质 · 物理学 2012-01-31 Yoav Tsori , David Andelman , Jean-François Joanny

We analyze the localized phase of a general model of a directed polymer in the proximity of an interface that separates two solvents. Each monomer unit carries a charge, $\omega_n$, that determines the type (attractive or repulsive) and the…

概率论 · 数学 2007-05-23 G. Giacomin , F. L. Toninelli

In almost all of plasma theories for astrophysical objects, we have assumed the charge quasi-neutrality of unmagnetized plasmas in global scales. This assumption has been justified because if there is a charged plasma, it induces electric…

高能天体物理现象 · 物理学 2011-01-28 Shinji Koide

The effective quasistatic conductivity of composite polymeric electrolytes is studied in terms of a hard-core--penetrable-layer model. Used to incorporate the interface phenomena (such as amorphization of the polymer matrix around filler…

材料科学 · 物理学 2019-11-05 M. Ya. Sushko , A. K. Semenov

We discuss simulations of a simple model for polymer blends in the framework of the Rouse model. At odds with standard predictions, large dynamic asymmetry between the two components induces strong non-exponentiality of the Rouse modes for…

软凝聚态物质 · 物理学 2009-11-13 Angel J. Moreno , Juan Colmenero

Complex coacervation, known as the liquid-liquid phase separation of solutions with oppositely charged polyelectrolytes, has attracted substantial interest in recent years. We study the effect of the charge regulation (CR) mechanism on the…

软凝聚态物质 · 物理学 2021-07-23 Bin Zheng , Yael Avni , David Andelman , Rudolf Podgornik