相关论文: Modeling truncated hemoglobin vibrational dynamics
We present a general method by which linear quantum Hamiltonian dynamics with exponentially many degrees of freedom is replaced by approximate classical nonlinear dynamics with the number of degrees of freedom (phase space dimensionality)…
We investigate the dynamical stability of the holographic system with two order parameters, which exhibits competition and coexistence of condensations. In the linear regime, we have developed the gauge dependent formalism to calculate the…
The simplest model of three coupled Bose-Einstein Condensates (BEC) is investigated using a group theoretical method. The stationary solutions are determined using the SU(3) group under the mean field approximation. This semiclassical…
We numerically investigate the relaxation dynamics in an isolated quantum system of interacting bosons trapped in a double-well potential after an integrability breaking quench. Using the statistics of the spectrum, we identify the…
We study the transport properties of an ultracold gas of Bose-Einstein condensate that is coupled from a magnetic trap into a one-dimensional waveguide. Our theoretical approach to tackle this problem is based on the truncated Wigner method…
We investigate the time-dependent, coherent, and dissipative dynamics of bound particles in single multilevel quantum dots in the presence of sequential tunnelling transport. We focus on the nonequilibrium regime where several channels are…
Nucleic acids have been regarded as stiff polymers with long-range flexibility and generally modeled using elastic rod models of polymer physics. Notwithstanding, investigations carried out over the past few years on single fragments of…
We study the Hamiltonian dynamics of the spherical spin model with fully-connected two-body interactions drawn from a Gaussian probability distribution. In the statistical physics framework, the potential energy is of the so-called $p=2$…
The entanglement and coherence of the wobbling mode are studied in the framework of the particle plus triaxial rotor model for the one-quasiparticle nucleus $^{135}$Pr and the two-quasiparticles nucleus $^{130}$Ba. The focus lies on the…
Model order reduction is a technique that is used to construct low-order approximations of large-scale dynamical systems. In this paper, we investigate a balancing based model order reduction method for dynamical systems with a linear…
An approach to non-adiabatic dynamics of atoms in molecular and condensed matter systems under general non-equilibrium conditions is proposed. In this method interaction between nuclei and electrons is considered explicitly up to the second…
The E. coli glucose-galactose chemosensory receptor is a 309 residue, 32 kDa protein consisting of two distinct structural domains. In this computational study, we studied the protein's thermal fluctuations, including both the large scale…
The Hamiltonian Mean-Field (HMF) model belongs to a broad class of statistical physics models with non-additive Hamiltonians that reveal many non-trivial properties, such as non-equivalence of statistical ensembles, ergodicity breaking, and…
In this paper, we consider a model reduction technique for stabilizable and detectable stochastic systems. It is based on a pair of Gramians that we analyze in terms of well-posedness. Subsequently, dominant subspaces of the stochastic…
We study the mean-field dynamics and the reduced-dimension character of two-mode Bose-Einstein condensates (BECs) in highly anisotropic traps. By means of perturbative techniques, we show that the tightly confined (transverse) degrees of…
We study the equilibrium dynamics of a weakly interacting Bose-Einstein condensate trapped in a box. In our approach we use a semiclassical approximation similar to the description of a multi-mode laser. In dynamical equations derived from…
Dynamic facilitation theory assumes short-ranged dynamic constraints to be the essential feature of supercooled liquids and draws much of its conclusions from the study of kinetically constrained models. While deceptively simple, these…
In the study of relaxation processes in coherent non-equilibrium dynamics of quenched quantum systems, ultracold atoms in optical superlattices with periodicity two provide a very fruitful test ground. In this work, we consider the dynamics…
We investigate the accuracy and efficiency of the semiclassical Frozen Gaussian method in describing electron dynamics in real time. Model systems of two soft-Coulomb-interacting electrons are used to study correlated dynamics under…
This article is devoted to the long-time dynamics of point-vortex type systems near thermal equilibrium and to the possible emergence of collisional relaxation. More precisely, we consider a tagged particle coupled to a large number of…