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The dramatic outbreak of the coronavirus disease 2019 (COVID-19) pandemics and its ongoing progression boosted the scientific community's interest in epidemic modeling and forecasting. The SIR (Susceptible-Infected-Removed) model is a…

种群与进化 · 定量生物学 2021-02-24 Dimiter Prodanov

We investigate the information-theoretical limits of inference tasks in epidemic spreading on graphs in the thermodynamic limit. The typical inference tasks consist in computing observables of the posterior distribution of the epidemic…

物理与社会 · 物理学 2023-12-25 Alfredo Braunstein , Louise Budzynski , Matteo Mariani

A broad class of systems, including ecological, epidemiological, and sociological ones, are characterized by populations of individuals assigned to specific categories, e.g., a chemical species, an opinion or an epidemic state, that are…

Classical compartmental models in epidemiology often assume a homogeneous population for simplicity, which neglects the inherent heterogeneity among individuals. This assumption frequently leads to inaccurate predictions when applied to…

种群与进化 · 定量生物学 2024-09-09 Ning Jiang , Weiqi Chu , Yao Li

The acute phase of the Covid-19 pandemic has made apparent the need for decision support based upon accurate epidemic modeling. This process is substantially hampered by under-reporting of cases and related data incompleteness issues. In…

应用统计 · 统计学 2026-03-10 Anastasios Apsemidis , Nikolaos Demiris

A novel predictive modeling framework for the spread of infectious diseases using high dimensional partial differential equations is developed and implemented. A scalar function representing the infected population is defined on a…

种群与进化 · 定量生物学 2020-07-06 Sashikumaar Ganesan , Deepak Subramani

Epidemiological forecasts are beset by uncertainties about the underlying epidemiological processes, and the surveillance process through which data are acquired. We present a Bayesian inference methodology that quantifies these…

Characterizing the spatial extent of epidemics at the outbreak stage is key to controlling the evolution of the disease. At the outbreak, the number of infected individuals is typically small, so that fluctuations around their average are…

种群与进化 · 定量生物学 2013-03-21 Eric Dumonteil , Satya N. Majumdar , Alberto Rosso , Andrea Zoia

We consider the control of the COVID-19 pandemic through a standard SIR compartmental model. This control is induced by the aggregation of individuals' decisions to limit their social interactions: when the epidemic is ongoing, an…

物理与社会 · 物理学 2020-06-22 Romuald Elie , Emma Hubert , Gabriel Turinici

Emerging infectious diseases are existential threats to human health and global stability. The recent outbreaks of the novel coronavirus COVID-19 have rapidly formed a global pandemic, causing hundreds of thousands of infections and huge…

应用统计 · 统计学 2020-06-02 Chuansai Zhou , Wen Yuan , Jun Wang , Haiyong Xu , Yong Jiang , Xinmin Wang , Qiuzi Han Wen , Pingwen Zhang

Current efforts of modelling COVID-19 are often based on the standard compartmental models such as SEIR and their variations. As pre-symptomatic and asymptomatic cases can spread the disease between populations through travel, it is…

物理与社会 · 物理学 2020-10-06 Xiaoye Ding , Shenyang Huang , Abby Leung , Reihaneh Rabbany

In their response to the COVID-19 outbreak, governments face the dilemma to balance public health and economy. Mobility plays a central role in this dilemma because the movement of people enables both economic activity and virus spread. We…

Suppose we have individual data from an internal study and various summary statistics from relevant external studies. External summary statistics have the potential to improve statistical inference for the internal population; however, it…

统计方法学 · 统计学 2026-02-06 Wenjie Hu , Ruoyu Wang , Wei Li , Wang Miao

The COVID-19 outbreak has stimulated the interest in the proposal of novel epidemiological models to predict the course of the epidemic so as to help planning effective control strategies. In particular, in order to properly interpret the…

机器学习 · 计算机科学 2021-01-29 Andrea Zugarini , Enrico Meloni , Alessandro Betti , Andrea Panizza , Marco Corneli , Marco Gori

Contagious diseases can spread quickly in human populations, either through airborne transmission or if some other spreading vectors are abundantly accessible. They can be particularly devastating if the impact on individuals' health has…

物理与社会 · 物理学 2022-07-20 Bram A. Siebert , James P. Gleeson , M. Asllani

The rapid spread of the Coronavirus (COVID-19) confronts policy makers with the problem of measuring the effectiveness of containment strategies, balancing public health considerations with the economic costs of social distancing measures.…

物理与社会 · 物理学 2021-04-02 Claudius Gros , Roser Valenti , Lukas Schneider , Kilian Valenti , Daniel Gros

Modelling the transmission dynamics of an infectious disease is a complex task. Not only it is difficult to accurately model the inherent non-stationarity and heterogeneity of transmission, but it is nearly impossible to describe,…

统计计算 · 统计学 2023-07-19 Sanmitra Ghosh , Paul J. Birrell , Daniela De Angelis

Global pandemics, such as the recent COVID-19 crisis, highlight the need for stochastic epidemic models that can capture the randomness inherent in the spread of disease. Such models must be accompanied by methods for estimating parameters…

定量方法 · 定量生物学 2026-04-13 Vincent Wieland , Nils Wassmuth , Lorenzo Contento , Martin Kühn , Jan Hasenauer

One way to study the spread of disease is through mathematical models. The most successful models compartmentalize the host population according to their infectious stage, e.g., susceptible (S), infected (I), exposed (E), and recovered (R).…

种群与进化 · 定量生物学 2024-09-25 Enrique C. Gabrick , Ervin K. Lenzi , Antonio M. Batista

We propose a forecasting method for predicting epidemiological health series on a two-week horizon at the regional and interregional resolution. The approach is based on model order reduction of parametric compartmental models, and is…

统计方法学 · 统计学 2020-12-11 Athmane Bakhta , Thomas Boiveau , Yvon Maday , Olga Mula