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The Bloch-Torrey equation governs the evolution of the transverse magnetization in diffusion magnetic resonance imaging, where two mechanisms are at play: diffusion of spins (Laplacian term) and their precession in a magnetic field gradient…

计算物理 · 物理学 2021-10-14 Nicolas Moutal , Antoine Moutal , Denis S. Grebenkov

The complex transverse water proton magnetization subject to diffusion-encoding magnetic field gradient pulses in a heterogeneous medium such as brain tissue can be modeled by the Bloch-Torrey partial differential equation. The spatial…

数值分析 · 数学 2020-10-28 Jing-Rebecca Li , Try Nguyen Tran , Van-Dang Nguyen

An approximative method for solving the Bloch-Torrey equation in general porous media is presented. The method expand the boundaries defining the porous media using electrostatic charges. As a result the eigenvalue problem of the Laplace…

软凝聚态物质 · 物理学 2013-08-29 Matias Nordin

Purpose: Diffusion MRI (dMRI) suffers from eddy currents induced by strong diffusion gradients, which introduce artefacts that can impair subsequent diffusion metric analysis. Existing retrospective correction techniques that correct for…

医学物理 · 物理学 2022-06-29 Jake J. Valsamis , Paul I. Dubovan , Corey A. Baron

We develop an approach, by calculating the autocorrelation function of spins, to derive the magnetic field gradient induced transverse ($T_2$) relaxation of spins undergoing restricted diffusion. This approach is an extension to the method…

原子物理 · 物理学 2012-03-20 W. Zheng , H. Gao , J. -G. Liu , Y. Zhang , Q. Ye , C. Swank

Purpose: Stimulated echo acquisition mode (STEAM) diffusion MRI can be advantageous over pulsed-gradient spin-echo (PGSE) for diffusion times that are long compared to $\ttwo$. It is important therefore for biomedical diffusion imaging…

医学物理 · 物理学 2013-06-13 Daniel C. Alexander , Tim B. Dyrby

Time-dependent diffusion behavior is probed over sub-millisecond timescales in a single shot using an NMR static gradient, time-incremented echo train acquisition (SG-TIETA) framework. The method extends the Carr-Purcell-Meiboom-Gill (CPMG)…

定量方法 · 定量生物学 2021-03-18 Teddy X. Cai , Nathan H. Williamson , Velencia J. Witherspoon , Rea Ravin , Peter J. Basser

The efficient computer optimization of magnetic resonance pulses and pulse sequences involves the calculation of a problem-adapted cost function as well as its gradients with respect to all controls applied. The gradients generally can be…

最优化与控制 · 数学 2025-07-21 Stella Slad , Burkhard Luy

A perturbation method for computing quick estimates of the echo decay in pulsed spin echo gradient NMR diffusion experiments in the short gradient pulse limit is presented. The perturbation basis involves (relatively few) dipole…

计算物理 · 物理学 2015-05-27 Matias Nordin , Martin Nilsson Jacobi , Magnus Nydén

This paper proposes a multi-shell sampling scheme and corresponding transforms for the accurate reconstruction of the diffusion signal in diffusion MRI by expansion in the spherical polar Fourier (SPF) basis. The sampling scheme uses an…

计算机视觉与模式识别 · 计算机科学 2017-05-15 Alice P. Bates , Zubair Khalid , Jason D. McEwen , Rodney A. Kennedy

Sparse dictionary learning is a popular method for representing signals as linear combinations of a few elements from a dictionary that is learned from the data. In the classical setting, signals are represented as vectors and the…

最优化与控制 · 数学 2019-09-20 Evan Schwab , Benjamin D. Haeffele , René Vidal , Nicolas Charon

We develop an immersed-boundary approach to modeling reaction-diffusion processes in dispersions of reactive spherical particles, from the diffusion-limited to the reaction-limited setting. We represent each reactive particle with a…

数值分析 · 数学 2015-06-16 A. Pal Singh Bhalla , B. E. Griffith , N. A. Patankar , A. Donev

We consider the problem of making nonparametric inference in a class of multi-dimensional diffusions in divergence form, from low-frequency data. Statistical analysis in this setting is notoriously challenging due to the intractability of…

统计方法学 · 统计学 2025-01-23 Matteo Giordano , Sven Wang

Diffusion processes arise in many fields, and so simulating the path of a diffusion is an important problem. It is usually necessary to make some sort of approximation via model-discretization, but a recently introduced class of algorithms,…

统计方法学 · 统计学 2013-11-25 Paul A. Jenkins

We present an analytical closed form expression, which gives a good approximate propagator for diffusion on the sphere. Our formula is the spherical counterpart of the Gaussian propagator for diffusion on the plane. While the analytical…

统计力学 · 物理学 2016-10-05 Abhijit Ghosh , Joseph Samuel , Supurna Sinha

We propose a general framework for conditional sampling in PDE-based inverse problems, targeting the recovery of whole solutions from extremely sparse or noisy measurements. This is accomplished by a function-space diffusion model and…

Anomalous diffusion exists widely in polymer and biological systems. Pulsed field gradient (PFG) techniques have been increasingly used to study anomalous diffusion in NMR and MRI. However, the interpretation of PFG anomalous diffusion is…

化学物理 · 物理学 2016-11-22 Guoxing Lin

This article is aimed at extending the framework of optimal control techniques to the situation where the control field values are restricted to a finite set. We propose a generalization of the standard GRAPE algorithm suited to this…

最优化与控制 · 数学 2015-10-28 G. Dridi , M. Lapert , Julien Salomon , D Sugny , S. J. Glaser

We propose a new method for finding the exact analytical solution in Laplace domain for the problem where the probability density of a random walker in a piece-wise linear potential in presence of a rectangular sink of arbitrary width and…

统计力学 · 物理学 2020-03-17 Proma Mondal , Aniruddha Chakraborty

The Gaussian phase approximation (GPA) underlies many standard diffusion magnetic resonance (MR) signal models, yet its validity is rarely scrutinized. Here, we assess the validity of the GPA by analytically deriving the excess phase…

医学物理 · 物理学 2026-01-01 Teddy X Cai , Nathan H Williamson , Peter J Basser
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